HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.1 nTPM
HPA:55.1 nTPM
GTEx:164.3 nTPM
FANTOM5:99.7 Scaled Tags Per Million
Pig:70.1 nTPM
Mouse:109.5 nTPM
Allen mouse:18.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001393Antibody CAB007766
Glial cells Not detectedMedium
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.1
Sample id Sample description nTPM
Hippocampus
nTPM: 47.3
1855 Male, age 76, left hemisphere 54.6
2148 Female, age 91, left hemisphere 46.9
2621 Female, age 67, right hemisphere 46.1
2529 Female, age 94, left hemisphere 45.9
1898 Male, age 80, left hemisphere 45.3
1911 Female, age 85, right hemisphere 45.2
Dentate gyrus
nTPM: 48.5
2010 Male, age 76, both hemispheres 53.9
2246 Female, age 85, both hemispheres 50.4
2528 Male, age 74, both hemispheres 49.2
2531 Female, age 67, both hemispheres 46.2
2530 Female, age 94, left hemisphere 45.8
1927 Female, age 91, both hemispheres 45.4
Entorhinal gyrus
nTPM: 46.6
1787 Male, age 76, left hemisphere 51.8
2613 Female, age 94, left hemisphere 46.6
1938 Female, age 85, left hemisphere 45.5
2686 Male, age 75, right hemisphere 45.5
2117 Female, age 91, right hemisphere 45.3
2764 Male, age 80, right hemisphere 45.2
Hippocampus, CA1
nTPM: 46.9
2045 Male, age 76, both hemispheres 52.5
2527 Male, age 74, both hemispheres 45.9
2749 Male, age 80, left hemisphere 45.5
1873 Female, age 85, both hemispheres 45.4
2082 Female, age 91, right hemisphere 45.3
Hippocampus, CA2
nTPM: 46.8
2113 Female, age 91, right hemisphere 47.9
2437 Female, age 94, left hemisphere 47.7
1940 Female, age 85, left hemisphere 47.6
1892 Male, age 76, both hemispheres 46.0
2249 Male, age 74, both hemispheres 46.0
1963 Male, age 80, left hemisphere 45.5
Hippocampus, CA3
nTPM: 51.7
2436 Male, age 74, both hemispheres 75.2
2137 Male, age 80, left hemisphere 51.9
1867 Male, age 76, both hemispheres 45.9
2861 Female, age 67, both hemispheres 45.9
2620 Female, age 94, left hemisphere 45.8
1891 Female, age 85, both hemispheres 45.3
Parahippocampal cortex
nTPM: 50.0
2245 Female, age 91, both hemispheres 65.6
1850 Male, age 80, both hemispheres 59.1
2018 Male, age 76, both hemispheres 52.3
2532 Female, age 72, left hemisphere 48.2
2693 Female, age 94, both hemispheres 46.2
2250 Female, age 67, right hemisphere 45.9
2692 Male, age 74, both hemispheres 45.9
1990 Female, age 91, right hemisphere 45.6
2622 Female, age 67, right hemisphere 45.6
1933 Female, age 85, both hemispheres 45.2
Perirhinal gyrus
nTPM: 55.1
1841 Female, age 85, right hemisphere 60.4
2521 Female, age 94, right hemisphere 57.8
1847 Female, age 91, left hemisphere 55.9
2848 Male, age 76, right hemisphere 51.7
1794 Male, age 80, right hemisphere 49.9
Subiculum
nTPM: 52.7
2438 Female, age 94, left hemisphere 81.5
2042 Male, age 76, both hemispheres 51.8
2619 Male, age 74, both hemispheres 46.2
2729 Female, age 91, right hemisphere 45.8
1977 Female, age 85, both hemispheres 45.7
1901 Male, age 80, both hemispheres 45.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 164.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 164.3
Samples: 197

Max nTPM: 306.8
Min nTPM: 84.1
Std nTPM: 37.8
Median nTPM: 158.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 306.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 258.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 255.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 246.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 243.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 242.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 237.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 236.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 231.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 229.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 229.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.7
FF:10169-103B7 60 years, female 111.9
FF:10153-102I9 76 years, female 87.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.1
Samples: 4

Max nTPM: 88.1
Min nTPM: 50.4
Sample A Female 88.1
Sample B Female 70.1
Sample C Male 71.9
Sample D Male 50.4
Entorhinal cortex
nTPM: 66.5
Samples: 4

Max nTPM: 73.5
Min nTPM: 61.1
Sample A Female 70.2
Sample B Female 73.5
Sample C Male 61.1
Sample D Male 61.2
Subiculum
nTPM: 63.2
Samples: 4

Max nTPM: 78.6
Min nTPM: 57.4
Sample A Female 78.6
Sample B Female 57.4
Sample C Male 58.4
Sample D Male 58.3
Ventral hippocampus
nTPM: 63.9
Samples: 4

Max nTPM: 81.0
Min nTPM: 43.5
Sample A Female 60.5
Sample B Female 43.5
Sample C Male 81.0
Sample D Male 70.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.5
Samples: 4

Max nTPM: 125.7
Min nTPM: 100.9
Sample A Male 100.9
Sample B Male 125.7
Sample C Female 107.2
Sample D Female 104.1
Hippocampal formation
nTPM: 97.8
Samples: 4

Max nTPM: 120.8
Min nTPM: 86.8
Sample A Male 120.8
Sample B Male 91.3
Sample C Female 86.8
Sample D Female 92.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
72735 Antisense, RP_040407_01_B07, Mouse strain C57BL/6J (56 days, male) 20.6
67752111 Antisense, RP_040922_01_C04, Mouse strain C57BL/6J (56 days, male) 16.5

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