HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.9 nTPM
HPA:31.9 nTPM
GTEx:17.8 nTPM
FANTOM5:103.3 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:10.7 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020659
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 31.9
1855 Male, age 76, left hemisphere 46.1
2621 Female, age 67, right hemisphere 38.4
2529 Female, age 94, left hemisphere 29.8
1911 Female, age 85, right hemisphere 29.5
2148 Female, age 91, left hemisphere 25.2
1898 Male, age 80, left hemisphere 22.3
Dentate gyrus
nTPM: 25.0
2530 Female, age 94, left hemisphere 40.3
2531 Female, age 67, both hemispheres 27.6
2246 Female, age 85, both hemispheres 27.2
2528 Male, age 74, both hemispheres 22.7
1927 Female, age 91, both hemispheres 18.2
2010 Male, age 76, both hemispheres 14.2
Entorhinal gyrus
nTPM: 20.8
2117 Female, age 91, right hemisphere 33.1
1787 Male, age 76, left hemisphere 21.1
2613 Female, age 94, left hemisphere 21.0
2686 Male, age 75, right hemisphere 20.2
2764 Male, age 80, right hemisphere 15.5
1938 Female, age 85, left hemisphere 14.0
Hippocampus, CA1
nTPM: 21.8
2082 Female, age 91, right hemisphere 34.7
1873 Female, age 85, both hemispheres 24.5
2045 Male, age 76, both hemispheres 21.0
2527 Male, age 74, both hemispheres 19.9
2749 Male, age 80, left hemisphere 8.9
Hippocampus, CA2
nTPM: 29.6
2437 Female, age 94, left hemisphere 44.5
2113 Female, age 91, right hemisphere 37.7
1940 Female, age 85, left hemisphere 35.4
1963 Male, age 80, left hemisphere 22.0
1892 Male, age 76, both hemispheres 20.4
2249 Male, age 74, both hemispheres 17.5
Hippocampus, CA3
nTPM: 23.3
2861 Female, age 67, both hemispheres 39.1
1867 Male, age 76, both hemispheres 27.8
1891 Female, age 85, both hemispheres 25.7
2436 Male, age 74, both hemispheres 19.1
2137 Male, age 80, left hemisphere 16.8
2620 Female, age 94, left hemisphere 11.5
Parahippocampal cortex
nTPM: 19.0
2250 Female, age 67, right hemisphere 27.2
2622 Female, age 67, right hemisphere 24.3
2693 Female, age 94, both hemispheres 21.9
2018 Male, age 76, both hemispheres 21.1
2245 Female, age 91, both hemispheres 20.7
2692 Male, age 74, both hemispheres 16.7
2532 Female, age 72, left hemisphere 16.0
1850 Male, age 80, both hemispheres 15.2
1990 Female, age 91, right hemisphere 14.1
1933 Female, age 85, both hemispheres 12.8
Perirhinal gyrus
nTPM: 15.8
2521 Female, age 94, right hemisphere 17.0
2848 Male, age 76, right hemisphere 16.4
1794 Male, age 80, right hemisphere 15.9
1847 Female, age 91, left hemisphere 15.3
1841 Female, age 85, right hemisphere 14.2
Subiculum
nTPM: 27.7
2438 Female, age 94, left hemisphere 44.3
2729 Female, age 91, right hemisphere 35.9
2042 Male, age 76, both hemispheres 28.9
2619 Male, age 74, both hemispheres 27.6
1901 Male, age 80, both hemispheres 19.5
1977 Female, age 85, both hemispheres 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 55.0
Min nTPM: 1.9
Std nTPM: 9.7
Median nTPM: 15.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 55.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 54.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 50.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 48.5
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 47.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 43.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 41.2
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 40.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 37.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 37.1
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 33.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.3
FF:10153-102I9 76 years, female 111.4
FF:10169-103B7 60 years, female 95.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 19.5
Min nTPM: 14.2
Sample A Female 19.5
Sample B Female 15.5
Sample C Male 19.0
Sample D Male 14.2
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 18.7
Min nTPM: 13.1
Sample A Female 18.7
Sample B Female 16.9
Sample C Male 17.2
Sample D Male 13.1
Subiculum
nTPM: 16.5
Samples: 4

Max nTPM: 22.4
Min nTPM: 13.4
Sample A Female 22.4
Sample B Female 15.6
Sample C Male 14.4
Sample D Male 13.4
Ventral hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 21.6
Min nTPM: 17.0
Sample A Female 17.8
Sample B Female 17.0
Sample C Male 21.6
Sample D Male 17.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.6
Sample A Male 11.6
Sample B Male 9.6
Sample C Female 10.8
Sample D Female 11.0
Hippocampal formation
nTPM: 9.6
Samples: 4

Max nTPM: 9.7
Min nTPM: 9.3
Sample A Male 9.7
Sample B Male 9.6
Sample C Female 9.6
Sample D Female 9.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69874096 Antisense, RP_050512_02_F06, Mouse strain C57BL/6J (56 days, male) 0.6

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