HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.9 nTPM
HPA:22.9 nTPM
GTEx:24.0 nTPM
FANTOM5:64.4 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:17.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011130Antibody HPA011931
Glial cells Not detectedMedium
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.9
Sample id Sample description nTPM
Hippocampus
nTPM: 22.4
1898 Male, age 80, left hemisphere 23.2
1855 Male, age 76, left hemisphere 23.1
2621 Female, age 67, right hemisphere 22.4
1911 Female, age 85, right hemisphere 22.2
2529 Female, age 94, left hemisphere 22.1
2148 Female, age 91, left hemisphere 21.6
Dentate gyrus
nTPM: 22.3
2010 Male, age 76, both hemispheres 24.1
1927 Female, age 91, both hemispheres 22.6
2246 Female, age 85, both hemispheres 22.1
2531 Female, age 67, both hemispheres 21.9
2528 Male, age 74, both hemispheres 21.8
2530 Female, age 94, left hemisphere 21.3
Entorhinal gyrus
nTPM: 22.3
1787 Male, age 76, left hemisphere 23.0
1938 Female, age 85, left hemisphere 22.7
2764 Male, age 80, right hemisphere 22.2
2613 Female, age 94, left hemisphere 22.0
2117 Female, age 91, right hemisphere 21.9
2686 Male, age 75, right hemisphere 21.8
Hippocampus, CA1
nTPM: 22.5
2045 Male, age 76, both hemispheres 23.4
1873 Female, age 85, both hemispheres 22.8
2527 Male, age 74, both hemispheres 22.2
2749 Male, age 80, left hemisphere 22.2
2082 Female, age 91, right hemisphere 22.1
Hippocampus, CA2
nTPM: 22.5
1892 Male, age 76, both hemispheres 24.1
1963 Male, age 80, left hemisphere 22.5
2437 Female, age 94, left hemisphere 22.5
2249 Male, age 74, both hemispheres 22.2
1940 Female, age 85, left hemisphere 22.1
2113 Female, age 91, right hemisphere 21.8
Hippocampus, CA3
nTPM: 22.1
1867 Male, age 76, both hemispheres 22.9
2137 Male, age 80, left hemisphere 22.6
1891 Female, age 85, both hemispheres 22.5
2620 Female, age 94, left hemisphere 21.7
2436 Male, age 74, both hemispheres 21.5
2861 Female, age 67, both hemispheres 21.2
Parahippocampal cortex
nTPM: 22.6
1850 Male, age 80, both hemispheres 23.3
2693 Female, age 94, both hemispheres 23.1
1933 Female, age 85, both hemispheres 22.9
2018 Male, age 76, both hemispheres 22.9
1990 Female, age 91, right hemisphere 22.4
2245 Female, age 91, both hemispheres 22.3
2250 Female, age 67, right hemisphere 22.3
2532 Female, age 72, left hemisphere 22.3
2692 Male, age 74, both hemispheres 22.3
2622 Female, age 67, right hemisphere 21.7
Perirhinal gyrus
nTPM: 22.9
2848 Male, age 76, right hemisphere 23.9
1794 Male, age 80, right hemisphere 23.0
1847 Female, age 91, left hemisphere 23.0
1841 Female, age 85, right hemisphere 22.5
2521 Female, age 94, right hemisphere 22.3
Subiculum
nTPM: 22.4
1977 Female, age 85, both hemispheres 23.5
2438 Female, age 94, left hemisphere 22.9
2042 Male, age 76, both hemispheres 22.8
1901 Male, age 80, both hemispheres 22.2
2729 Female, age 91, right hemisphere 21.8
2619 Male, age 74, both hemispheres 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.0
Samples: 197

Max nTPM: 46.2
Min nTPM: 12.4
Std nTPM: 5.2
Median nTPM: 23.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 46.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 44.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 39.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 37.0
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 37.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 36.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 36.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 35.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 34.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 33.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.4
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 56.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 11.2
Min nTPM: 9.0
Sample A Female 9.0
Sample B Female 11.2
Sample C Male 10.6
Sample D Male 11.0
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.6
Sample A Female 9.9
Sample B Female 9.6
Sample C Male 11.0
Sample D Male 11.1
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 11.7
Min nTPM: 9.4
Sample A Female 9.4
Sample B Female 11.5
Sample C Male 11.7
Sample D Male 11.6
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.4
Sample A Female 9.4
Sample B Female 11.9
Sample C Male 9.4
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.0
Sample A Male 18.3
Sample B Male 18.1
Sample C Female 20.3
Sample D Female 15.0
Hippocampal formation
nTPM: 17.5
Samples: 4

Max nTPM: 18.8
Min nTPM: 16.6
Sample A Male 18.8
Sample B Male 17.1
Sample C Female 16.6
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70429489 Antisense, RP_050614_01_G09, Mouse strain C57BL/6J (56 days, male) 0.5

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