PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:84.4 nTPM
HPA:84.4 nTPM
FANTOM5:170.8 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:8.1 nTPM
Allen mouse:0.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 84.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 71.3
1984 Male, age 76, both hemispheres 75.4
2090 Male, age 80, both hemispheres 70.4
2188 Female, age 91, both hemispheres 69.8
2301 Female, age 85, both hemispheres 69.5
Area postrema
nTPM: 82.1
2799 Male, age 61, both hemispheres 89.0
2306 Male, age 80, both hemispheres 81.4
2054 Male, age 76, both hemispheres 75.9
Cuneate nuclei
nTPM: 72.9
2131 Male, age 76, both hemispheres 74.9
2376 Male, age 61, both hemispheres 73.8
2381 Male, age 80, both hemispheres 70.1
Dorsal cochlear nucleus
nTPM: 75.2
2802 Male, age 74, right hemisphere 80.6
2370 Male, age 61, both hemispheres 75.7
2058 Male, age 76, both hemispheres 75.4
2378 Male, age 80, both hemispheres 74.3
2187 Female, age 91, both hemispheres 69.8
Dorsal medullary reticular nucleus
nTPM: 74.0
2040 Female, age 85, both hemispheres 78.3
2373 Male, age 61, both hemispheres 73.2
2088 Male, age 76, both hemispheres 70.6
Dorsal motor vagal complex
nTPM: 79.7
2797 Male, age 61, both hemispheres 91.1
2813 Female, age 72, unknown 85.3
2000 Male, age 74, unknown 81.5
2185 Male, age 76, both hemispheres 80.8
2643 Male, age 74, both hemispheres 80.3
2844 Male, age 55, unknown 76.1
2133 Female, age 91, both hemispheres 73.1
2807 Female, age 85, both hemispheres 69.0
Dorsal tegmental nucleus
nTPM: 74.3
2083 Male, age 80, both hemispheres 76.1
1936 Male, age 76, left hemisphere 76.0
2326 Male, age 74, both hemispheres 72.6
2358 Male, age 61, both hemispheres 72.3
Dorsolateral tegmental area
nTPM: 74.5
2654 Male, age 80, both hemispheres 77.7
2751 Female, age 85, both hemispheres 76.6
2360 Male, age 74, both hemispheres 73.3
2337 Male, age 61, both hemispheres 72.6
2141 Male, age 76, both hemispheres 72.3
Gigantocellular reticular nuclei, medullary
nTPM: 74.4
1876 Female, age 85, both hemispheres 78.1
2462 Male, age 74, both hemispheres 75.4
2314 Male, age 61, both hemispheres 75.3
2387 Female, age 91, both hemispheres 75.1
2022 Male, age 76, right hemisphere 74.3
2310 Male, age 80, both hemispheres 68.4
Gigantocellular reticular nuclei, pars
nTPM: 72.9
2084 Female, age 85, both hemispheres 76.3
2168 Male, age 76, both hemispheres 72.8
2336 Male, age 61, both hemispheres 72.7
2706 Male, age 80, both hemispheres 72.5
2330 Male, age 80, both hemispheres 70.1
Inferior olive
nTPM: 84.4
2563 Male, age 74, both hemispheres 96.1
2085 Female, age 85, both hemispheres 87.8
2379 Male, age 80, both hemispheres 81.9
2178 Male, age 61, both hemispheres 78.2
2628 Female, age 91, both hemispheres 78.2
Kolliker-Fuse nucleus
nTPM: 77.1
2315 Male, age 76, right hemisphere 85.4
2163 Male, age 80, both hemispheres 76.9
2793 Female, age 91, left hemisphere 69.1
Lateral lemniscal nuclei
nTPM: 72.2
2169 Male, age 76, both hemispheres 75.0
2453 Male, age 74, right hemisphere 73.9
2746 Female, age 85, left hemisphere 73.0
2036 Male, age 80, both hemispheres 72.5
2320 Female, age 91, left hemisphere 66.7
Lateral medullary reticular nucleus
nTPM: 76.7
2044 Male, age 76, both hemispheres 79.1
2804 Female, age 91, both hemispheres 78.3
2374 Male, age 61, both hemispheres 78.0
2190 Female, age 85, both hemispheres 77.4
2852 Male, age 80, both hemispheres 75.0
2305 Male, age 74, both hemispheres 72.4
Lateral parabrachial nucleus
nTPM: 75.5
2139 Female, age 85, right hemisphere 81.4
2013 Male, age 80, both hemispheres 76.0
2792 Male, age 76, both hemispheres 75.0
2790 Male, age 61, both hemispheres 69.5
Lateral vestibular nucleus
nTPM: 75.2
2184 Male, age 76, both hemispheres 75.8
2311 Male, age 80, both hemispheres 74.5
Locus coeruleus
nTPM: 74.6
2317 Female, age 72, unknown 77.4
2123 Female, age 91, both hemispheres 76.5
1980 Male, age 76, both hemispheres 75.4
2788 Male, age 74, unknown 75.3
2014 Male, age 55, unknown 75.0
2162 Male, age 80, both hemispheres 71.7
2720 Male, age 74, both hemispheres 71.2
Medial olivary nucleus
nTPM: 80.9
2138 Female, age 91, both hemispheres 91.1
1943 Male, age 61, both hemispheres 78.1
1962 Male, age 76, both hemispheres 77.6
2851 Male, age 80, both hemispheres 76.9
Medial parabrachial nucleus
nTPM: 72.7
2854 Male, age 80, both hemispheres 73.8
2170 Female, age 91, both hemispheres 73.3
2463 Female, age 85, right hemisphere 73.1
2786 Male, age 76, both hemispheres 72.8
2156 Male, age 61, both hemispheres 70.6
Medial periolivary nuclei
nTPM: 74.1
2791 Male, age 74, right hemisphere 79.1
2063 Male, age 76, both hemispheres 77.9
2171 Female, age 85, both hemispheres 76.0
2081 Male, age 80, both hemispheres 69.9
2458 Female, age 91, both hemispheres 67.8
Medial vestibular nucleus
nTPM: 77.2
2093 Male, age 80, both hemispheres 78.4
2801 Male, age 74, both hemispheres 77.7
2134 Male, age 76, both hemispheres 77.5
2624 Male, age 61, both hemispheres 77.3
2743 Female, age 85, both hemispheres 76.7
2803 Female, age 91, both hemispheres 75.7
Motor facial nucleus
nTPM: 73.1
2062 Male, age 76, both hemispheres 78.7
2795 Female, age 91, both hemispheres 76.6
2365 Male, age 74, right hemisphere 75.9
2697 Female, age 85, both hemispheres 70.1
2126 Male, age 61, both hemispheres 70.0
2327 Male, age 80, both hemispheres 67.2
Motor hypoglossal nucleus
nTPM: 74.6
2461 Male, age 61, both hemispheres 83.5
2125 Female, age 91, both hemispheres 75.2
2132 Female, age 85, both hemispheres 71.9
2277 Male, age 76, both hemispheres 71.5
2182 Male, age 80, both hemispheres 70.8
Motor trigeminal nucleus
nTPM: 70.1
2309 Male, age 76, both hemispheres 73.8
2335 Male, age 61, both hemispheres 70.6
2560 Male, age 74, both hemispheres 70.1
2079 Male, age 80, both hemispheres 70.0
2321 Female, age 91, both hemispheres 66.2
Nuclei of the trapezoid body
nTPM: 73.8
1983 Male, age 76, both hemispheres 80.2
2159 Male, age 61, both hemispheres 74.7
2735 Female, age 85, both hemispheres 74.2
2368 Female, age 91, both hemispheres 70.6
2166 Male, age 80, both hemispheres 69.3
Nucleus ambiguus
nTPM: 73.2
2071 Male, age 76, both hemispheres 77.8
2096 Female, age 85, both hemispheres 68.6
Nucleus cuneatus
nTPM: 77.1
2564 Male, age 74, both hemispheres 84.9
2380 Male, age 80, both hemispheres 79.4
2562 Male, age 61, both hemispheres 78.2
2100 Male, age 76, both hemispheres 75.5
2805 Female, age 91, both hemispheres 72.5
2808 Female, age 85, both hemispheres 72.3
Nucleus gracilis
nTPM: 79.3
2627 Male, age 74, both hemispheres 90.3
2299 Female, age 85, both hemispheres 76.5
2382 Male, age 80, both hemispheres 70.9
Nucleus raphe magnus
nTPM: 73.5
2051 Male, age 76, both hemispheres 78.3
2455 Male, age 74, both hemispheres 77.8
2160 Male, age 61, both hemispheres 74.7
2172 Female, age 85, both hemispheres 71.8
2328 Male, age 80, both hemispheres 71.2
2459 Female, age 91, both hemispheres 67.5
Nucleus raphe obscurus
nTPM: 74.6
2142 Male, age 76, midline 77.0
2845 Female, age 85, midline 73.9
2800 Male, age 61, midline 73.1
Nucleus raphe pallidus
nTPM: 74.4
1924 Male, age 61, midline 75.3
2183 Male, age 80, midline 74.4
2145 Male, age 76, midline 73.6
Nucleus tractus solitarii
nTPM: 76.3
2144 Female, age 91, right hemisphere 91.1
2191 Female, age 85, both hemispheres 74.0
2656 Male, age 76, both hemispheres 72.5
2307 Male, age 80, both hemispheres 67.5
Paramedian reticular nucleus
nTPM: 76.0
2050 Female, age 85, both hemispheres 78.6
2052 Male, age 76, both hemispheres 76.0
2057 Male, age 80, both hemispheres 75.2
2313 Male, age 61, both hemispheres 74.3
Parvicellular reticular nuclei
nTPM: 74.8
2119 Male, age 80, both hemispheres 78.5
2095 Male, age 76, both hemispheres 76.4
2558 Male, age 74, both hemispheres 69.7
Parvicellular reticular nuclei, medullary
nTPM: 74.0
2091 Female, age 85, both hemispheres 75.6
2189 Female, age 91, both hemispheres 74.3
2181 Male, age 80, left hemisphere 72.2
Peritrigeminal nucleus
nTPM: 79.3
2067 Female, age 85, both hemispheres 82.3
2136 Male, age 76, both hemispheres 80.4
2179 Male, age 61, both hemispheres 75.2
Pontine nuclei
nTPM: 72.4
1863 Male, age 55, unknown 79.0
2787 Female, age 85, both hemispheres 74.8
2109 Female, age 72, unknown 74.2
1968 Male, age 76, left hemisphere 73.8
2727 Male, age 61, right hemisphere 72.1
2115 Male, age 80, left hemisphere 69.0
2319 Female, age 91, both hemispheres 68.2
2454 Male, age 74, left hemisphere 67.7
Pontine raphe nucleus
nTPM: 72.4
2853 Male, age 76, midline 72.5
2122 Female, age 85, midline 72.4
Posteroventral cochlear nucleus
nTPM: 72.7
2371 Male, age 61, both hemispheres 75.9
2070 Male, age 76, both hemispheres 74.3
2752 Female, age 85, both hemispheres 73.7
2341 Male, age 80, both hemispheres 72.6
2135 Female, age 91, both hemispheres 67.0
Prepositus hypoglossal nucleus
nTPM: 76.5
2086 Male, age 80, both hemispheres 78.2
2855 Female, age 85, right hemisphere 74.9
Principal sensory trigeminal nucleus
nTPM: 71.0
2324 Male, age 76, both hemispheres 76.4
2158 Male, age 61, both hemispheres 70.7
2008 Male, age 80, left hemisphere 70.2
2367 Female, age 91, left hemisphere 66.7
Reticular pontine nucleus, caudal
nTPM: 70.6
2092 Male, age 76, both hemispheres 75.4
2559 Male, age 74, both hemispheres 69.6
2457 Female, age 91, both hemispheres 69.2
2332 Male, age 80, right hemisphere 68.3
Reticular pontine nucleus, oral
nTPM: 72.5
1939 Male, age 80, both hemispheres 78.0
2012 Female, age 85, both hemispheres 74.9
2167 Male, age 76, both hemispheres 74.6
2366 Female, age 91, both hemispheres 68.7
2361 Male, age 74, both hemispheres 66.2
Reticulotegmental nucleus
nTPM: 72.6
2333 Male, age 80, both hemispheres 74.8
2325 Male, age 76, both hemispheres 73.9
2452 Male, age 74, both hemispheres 71.0
2322 Female, age 91, both hemispheres 70.7
Spinal trigeminal nucleus, caudal
nTPM: 74.4
2390 Female, age 91, both hemispheres 77.0
2447 Male, age 76, both hemispheres 75.8
2642 Male, age 74, both hemispheres 74.0
2312 Male, age 61, both hemispheres 73.1
2308 Male, age 80, both hemispheres 72.2
Spinal trigeminal nucleus, interpolar
nTPM: 76.9
2625 Male, age 61, both hemispheres 85.9
2066 Male, age 76, right hemisphere 77.8
2033 Male, age 80, both hemispheres 75.2
2386 Female, age 85, both hemispheres 72.9
2389 Female, age 91, both hemispheres 72.5
Spinal trigeminal nucleus, oral
nTPM: 73.7
2737 Female, age 85, both hemispheres 74.3
2164 Male, age 80, both hemispheres 74.1
1978 Male, age 76, both hemispheres 72.7
Spinal vestibular nucleus
nTPM: 75.0
2806 Female, age 85, both hemispheres 77.9
2796 Male, age 61, both hemispheres 75.3
2748 Male, age 76, both hemispheres 75.0
2780 Male, age 80, both hemispheres 74.6
2186 Female, age 91, both hemispheres 73.9
2384 Male, age 74, both hemispheres 73.7
Subcoeruleus area
nTPM: 72.6
1958 Male, age 80, both hemispheres 76.3
2369 Female, age 85, left hemisphere 76.1
2089 Male, age 76, left hemisphere 71.0
2323 Female, age 91, left hemisphere 69.8
2451 Male, age 74, both hemispheres 69.7
Superior olive
nTPM: 71.7
2364 Male, age 74, right hemisphere 74.5
2020 Male, age 76, both hemispheres 74.1
1875 Female, age 85, both hemispheres 72.8
2561 Female, age 91, both hemispheres 68.7
2329 Male, age 80, right hemisphere 68.5
Superior vestibular nucleus
nTPM: 80.2
2383 Male, age 74, both hemispheres 87.5
2015 Male, age 80, both hemispheres 77.7
2061 Male, age 76, both hemispheres 75.4
Ventral medullary reticular nucleus
nTPM: 73.4
2372 Male, age 61, both hemispheres 75.7
2060 Male, age 76, both hemispheres 71.2
Ventral periolivary nuclei
nTPM: 73.7
2130 Female, age 85, both hemispheres 76.3
2165 Male, age 80, both hemispheres 75.9
2023 Male, age 76, both hemispheres 74.7
2794 Female, age 91, left hemisphere 67.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 76.0
1986 Male, age 76, both hemispheres 80.2
2741 Female, age 85, both hemispheres 76.9
2302 Female, age 91, both hemispheres 76.3
2180 Male, age 61, both hemispheres 75.6
2118 Male, age 80, both hemispheres 70.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 73.3
2840 Female, age 85, both hemispheres 76.4
1959 Male, age 76, both hemispheres 75.2
2161 Male, age 80, both hemispheres 73.3
2449 Male, age 74, both hemispheres 72.7
2359 Male, age 61, both hemispheres 72.5
2456 Female, age 91, both hemispheres 69.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 170.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 163.0
FF:10182-103D2 60 years, female 220.2
FF:10165-103B3 76 years, female 105.8
Medulla oblongata
Scaled Tags Per Million: 170.8
FF:10174-103C3 60 years, female 210.5
FF:10038-101F2 18-64 years, mixed 154.0
FF:10155-103A2 76 years, female 147.9
Pons
Scaled Tags Per Million: 105.5
FF:10033-101E6 18-54 years, mixed 105.5

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 21.3
Samples: 4

Max nTPM: 26.1
Min nTPM: 16.0
Sample A Female 20.5
Sample B Female 16.0
Sample C Male 22.7
Sample D Male 26.1
Pons
nTPM: 19.3
Samples: 4

Max nTPM: 21.4
Min nTPM: 16.3
Sample A Female 20.6
Sample B Female 16.3
Sample C Male 21.4
Sample D Male 18.9

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 8.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 8.1
Samples: 4

Max nTPM: 8.6
Min nTPM: 7.0
Sample A Male 8.6
Sample B Male 8.3
Sample C Female 7.0
Sample D Female 8.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.3
74819671 Antisense, RP_060315_02_G10, Mouse strain C57BL/6J (56 days, male) 0.4
69014518 Antisense, RP_050310_01_C05, Mouse strain C57BL/6J (56 days, male) 0.3
Pons
Expression energy: 0.4
74819671 Antisense, RP_060315_02_G10, Mouse strain C57BL/6J (56 days, male) 0.6
69014518 Antisense, RP_050310_01_C05, Mouse strain C57BL/6J (56 days, male) 0.2

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