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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:139.7 nTPM
FANTOM5:126.3 Scaled Tags Per Million
Pig:81.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA023840Antibody CAB012245
Glial cells Not detectedLow
Neuronal cells Not detectedMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 139.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 139.7
Samples: 246

Max nTPM: 321.5
Min nTPM: 76.0
Std nTPM: 35.8
Median nTPM: 134.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 321.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 257.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 256.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 226.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 225.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 223.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 220.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 220.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 215.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 205.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 203.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 203.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 199.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 198.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 197.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 196.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 196.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 196.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 195.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 193.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 192.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 191.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 189.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 186.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 185.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 184.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 183.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 183.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 182.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 180.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 180.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 179.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 179.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 178.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 177.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 177.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 175.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 174.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 174.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 174.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 173.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 173.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 173.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 172.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 170.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 170.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 170.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 169.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 168.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 168.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 168.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 166.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 166.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 165.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 164.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 164.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 164.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 164.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 163.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 162.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 161.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 161.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 160.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 160.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 160.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 159.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 158.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 158.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 157.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 155.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 155.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 154.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 154.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 153.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 152.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 152.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 152.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 152.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 152.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 151.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 150.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 149.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 149.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 148.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 148.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 148.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 148.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 148.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 147.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 146.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 146.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 145.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 145.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 145.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 145.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 144.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 143.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 143.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 143.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 142.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 142.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 141.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 141.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 141.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 140.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 140.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 139.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 139.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 139.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 139.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 138.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 138.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 137.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 137.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 137.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 137.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 137.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 137.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 136.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 135.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 135.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 134.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 134.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 133.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 133.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 133.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 133.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 133.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 132.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 132.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 132.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 132.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 132.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 131.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 131.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 131.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 131.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 130.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 129.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 129.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 128.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 128.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 128.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 127.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 127.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 127.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 126.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 126.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 125.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 125.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 124.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 124.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 123.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 123.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 122.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 121.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 121.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 121.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 120.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 120.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 120.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 120.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 120.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 119.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 119.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 118.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 118.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 118.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 118.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 118.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 116.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 115.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 115.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 115.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 114.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 113.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 113.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 112.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 112.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 111.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 111.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 111.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 111.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 111.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 111.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 110.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 109.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 109.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 109.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 109.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 109.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 109.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 108.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 108.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 108.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 108.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 107.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 107.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 107.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 107.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 106.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 106.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 105.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 105.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 105.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 105.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 105.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 104.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 104.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 104.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 104.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 104.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 103.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 103.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 102.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 102.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 102.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 102.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 101.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 101.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 100.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 99.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 99.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 99.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 99.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 99.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 98.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 98.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 97.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 96.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 96.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 94.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 93.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 93.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 93.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 91.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 88.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 88.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 88.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 87.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 82.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 82.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 77.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 76.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 126.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 126.3
FF:10164-103B2 76 years, female 126.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 81.2
Pig sample Sample description nTPM
Caudate
nTPM: 81.2
Samples: 4

Max nTPM: 89.2
Min nTPM: 70.3
Sample A Female 89.2
Sample B Female 81.0
Sample C Male 84.4
Sample D Male 70.3

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