Expression of RPLP1 in testis cancer - The Human Protein Atlas

TESTIS CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

RPLP1 is not prognostic in testis cancer

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 794.91

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

734.2

Number of samples

134

Samples

Sample	Description	FPKM
TCGA-2G-AAHL-01A	26 years, male, white, stage:i, alive, 7081 days	1944.6
TCGA-VF-A8AE-01A	39 years, male, white, stage:ia, alive, 727 days	1803.6
TCGA-4K-AA1I-01A	26 years, male, white, stage:ia, alive, 3 days	1487.5
TCGA-ZM-AA0N-01A	44 years, male, white, stage:ib, alive, 634 days	1368.7
TCGA-ZM-AA0E-01A	39 years, male, white, stage:ia, alive, 811 days	1355.0
TCGA-ZM-AA06-01A	45 years, male, white, stage:ib, alive, 1498 days	1333.9
TCGA-2G-AAEX-01A	38 years, male, white, stage:is, alive, 1259 days	1317.7
TCGA-XE-AAO4-01A	40 years, male, white, stage:ia, alive, 367 days	1237.5
TCGA-VF-A8A9-01A	31 years, male, white, stage:ia, alive, 1119 days	1225.8
TCGA-YU-A90W-01A	45 years, male, white, stage:ia, alive, 1113 days	1211.7
TCGA-2G-AAH8-01A	45 years, male, white, stage:iiic, alive, 2248 days	1199.2
TCGA-2G-AAFM-01A	31 years, male, white, stage:iia, alive, 503 days	1197.3
TCGA-XE-AAO6-01A	47 years, male, white, stage:ia, alive, 240 days	1186.2
TCGA-SB-A6J6-01A	22 years, male, white, stage:ia, alive, 413 days	1185.1
TCGA-2G-AAHP-01A	31 years, male, white, stage:is, alive, 5667 days	1169.5
TCGA-ZM-AA0D-01A	34 years, male, white, stage:ia, alive, 848 days	1142.8
TCGA-XE-AANR-01A	24 years, male, white, stage:i, alive, 14 days	1134.4
TCGA-VF-A8AA-01A	51 years, male, white, stage:i, alive, 1146 days	1132.1
TCGA-XE-AAOD-01A	39 years, male, white, stage:ib, alive, 2058 days	1117.4
TCGA-2G-AAF6-01A	28 years, male, white, stage:is, alive, 3491 days	1097.5
TCGA-2G-AAKD-01A	18 years, male, white, stage:iii, alive, 6340 days	1074.3
TCGA-4K-AA1G-01A	34 years, male, white, stage:is, alive, 436 days	1025.5
TCGA-ZM-AA0B-01A	32 years, male, white, stage:ia, alive, 838 days	1008.8
TCGA-2G-AAHT-01A	32 years, male, white, stage:is, alive, 542 days	989.5
TCGA-VF-A8AC-01A	29 years, male, white, stage:ia, alive, 1083 days	982.0
TCGA-2G-AAFH-01A	38 years, male, white, stage:iib, alive, 1375 days	981.1
TCGA-SB-A76C-01A	38 years, male, white, alive, 42 days	976.4
TCGA-2G-AAL7-01A	32 years, male, white, stage:is, alive, 3991 days	969.8
TCGA-2G-AAHG-01A	25 years, male, white, stage:i, alive, 1819 days	965.2
TCGA-2G-AAFO-01A	33 years, male, white, stage:iia, alive, 685 days	945.4
TCGA-2G-AAHC-01A	33 years, male, white, stage:is, alive, 5539 days	945.0
TCGA-WZ-A7V5-01A	27 years, male, white, stage:i, alive, 1061 days	926.5
TCGA-2G-AAFE-01A	37 years, male, white, stage:iia, alive, 4702 days	918.6
TCGA-2G-AAHN-01A	32 years, male, white, stage:i, alive, 6445 days	918.2
TCGA-ZM-AA0H-01A	50 years, male, white, stage:is, alive, 1736 days	912.2
TCGA-XE-A9SE-01A	35 years, male, white, stage:ia, alive, 708 days	907.5
TCGA-SO-A8JP-01A	29 years, male, white, stage:i, alive, 540 days	903.7
TCGA-S6-A8JX-01A	27 years, male, white, stage:ib, alive, 552 days	902.7
TCGA-XE-AANJ-01A	39 years, male, white, stage:is, alive, 2007 days	886.6
TCGA-YU-A90Q-01A	21 years, male, stage:ib, alive, 1964 days	883.6
TCGA-WZ-A8D5-01A	38 years, male, white, alive, 774 days	880.5
TCGA-2G-AAGW-01A	38 years, male, white, stage:is, alive, 4899 days	862.9
TCGA-W4-A7U2-01A	26 years, male, white, alive, 1263 days	860.9
TCGA-2G-AAFN-01A	26 years, male, white, stage:iiib, alive, 773 days	855.3
TCGA-XY-A89B-01A	35 years, male, white, stage:ia, alive, 471 days	853.2
TCGA-2G-AAGZ-01A	27 years, male, white, stage:iiia, alive, 5233 days	819.0
TCGA-XE-AAOF-01A	50 years, male, asian, stage:ia, alive, 1268 days	814.2
TCGA-XE-AANV-01A	52 years, male, stage:ib, alive, 1701 days	808.2
TCGA-SN-A84X-01A	21 years, male, white, stage:is, alive, 312 days	803.1
TCGA-2G-AAG3-01A	53 years, male, white, stage:is, alive, 1593 days	801.6
TCGA-2G-AAEW-01A	31 years, male, white, stage:is, dead, 618 days	788.3
TCGA-S6-A8JY-01A	27 years, male, white, stage:is, alive, 278 days	782.1
TCGA-YU-A90S-01A	26 years, male, white, stage:ia, alive, 971 days	779.4
TCGA-SN-A84Y-01A	18 years, male, white, stage:is, alive, 524 days	777.7
TCGA-XE-A8H4-01A	23 years, male, white, stage:ia, alive, 559 days	766.3
TCGA-2G-AAF4-01A	30 years, male, white, stage:i, alive, 2315 days	735.8
TCGA-2G-AAGO-01A	41 years, male, white, stage:is, alive, 4026 days	725.3
TCGA-4K-AA1H-01A	26 years, male, white, stage:ia, alive, 518 days	719.7
TCGA-XE-AAO3-01A	33 years, male, asian, stage:i, alive, 2857 days	717.7
TCGA-VF-A8A8-01A	18 years, male, white, stage:ia, alive, 1131 days	715.6
TCGA-2G-AAF8-01A	33 years, male, white, stage:ia, alive, 3911 days	712.6
TCGA-4K-AAAL-01A	31 years, male, white, stage:is, alive, 483 days	712.0
TCGA-ZM-AA05-01A	36 years, male, white, stage:iic, alive, 1126 days	711.6
TCGA-2G-AAG9-01A	25 years, male, white, stage:iiib, alive, 2234 days	710.3
TCGA-2G-AAGF-01A	28 years, male, white, stage:is, alive, 2734 days	695.5
TCGA-XY-A8S2-01A	67 years, male, white, stage:i, alive, 672 days	686.0
TCGA-2G-AAFL-01A	35 years, male, white, stage:ib, alive, 750 days	681.9
TCGA-2G-AAG8-01A	21 years, male, white, stage:ib, alive, 2289 days	678.8
TCGA-XE-A8H5-01A	29 years, male, stage:is, alive, 1217 days	671.6
TCGA-S6-A8JW-01A	37 years, male, white, stage:is, alive, 698 days	669.5
TCGA-2G-AAHA-01A	48 years, male, white, stage:ib, alive, 3349 days	655.1
TCGA-YU-A912-01A	34 years, male, black or african american, stage:iiic, alive, 866 days	651.1
TCGA-2G-AAFG-01A	30 years, male, white, stage:is, alive, 6183 days	649.5
TCGA-2G-AAGV-01A	23 years, male, white, alive, 4527 days	648.8
TCGA-2G-AAFY-01A	24 years, male, white, stage:iia, alive, 1099 days	645.4
TCGA-YU-A90Y-01A	23 years, male, black or african american, stage:iiic, dead, 17 days	638.8
TCGA-2G-AAGN-01A	41 years, male, white, stage:iiib, alive, 3656 days	633.8
TCGA-2G-AAKG-01A	22 years, male, white, stage:i, alive, 6598 days	622.8
TCGA-2G-AAH3-01A	20 years, male, white, stage:i, alive, 1822 days	607.5
TCGA-2G-AAGE-01A	21 years, male, white, stage:is, alive, 2478 days	604.5
TCGA-XE-A8H1-01A	24 years, male, white, stage:is, alive, 209 days	601.5
TCGA-2G-AAKL-01A	26 years, male, white, stage:ii, alive, 7023 days	600.9
TCGA-2G-AAH0-01A	30 years, male, white, stage:is, alive, 5477 days	593.0
TCGA-W4-A7U4-01A	23 years, male, white, alive, 738 days	592.8
TCGA-ZM-AA0F-01A	35 years, male, white, stage:ia, alive, 681 days	589.0
TCGA-XE-AAOB-01A	27 years, male, white, stage:is, dead, 513 days	588.7
TCGA-XY-A9T9-01A	37 years, male, white, stage:is, alive, 281 days	585.7
TCGA-VF-A8AB-01A	31 years, male, black or african american, stage:ia, alive, 760 days	581.0
TCGA-2X-A9D5-01A	49 years, male, white, stage:i, alive, 435 days	576.0
TCGA-SN-A6IS-01A	26 years, male, white, stage:is, alive, 496 days	573.3
TCGA-XE-AAOJ-01A	24 years, male, white, stage:is, alive, 1550 days	555.5
TCGA-XE-AAOL-01A	38 years, male, black or african american, stage:i, alive, 13 days	554.8
TCGA-2G-AAGK-01A	20 years, male, white, stage:is, alive, 3621 days	546.2
TCGA-2G-AAGA-01A	38 years, male, white, stage:iia, alive, 2439 days	532.8
TCGA-2G-AALP-01A	43 years, male, white, stage:iiib, alive, 2645 days	522.9
TCGA-2G-AAH4-01A	34 years, male, white, stage:ii, alive, 6210 days	515.6
TCGA-2G-AAF1-01A	28 years, male, asian, stage:is, alive, 1403 days	512.5
TCGA-YU-AA4L-01A	27 years, male, black or african american, stage:iiic, alive, 1573 days	494.0
TCGA-2G-AAKH-01A	19 years, male, white, stage:ii, alive, 6862 days	493.5
TCGA-X3-A8G4-01A	33 years, male, white, stage:is, alive, 856 days	492.6
TCGA-2G-AAFJ-01A	23 years, male, asian, alive, 792 days	488.8
TCGA-YU-A90P-01A	25 years, male, white, stage:ia, alive, 2069 days	481.0
TCGA-2G-AAFI-01A	41 years, male, white, stage:ib, alive, 675 days	477.9
TCGA-WZ-A7V4-01A	28 years, male, white, stage:i, alive, 894 days	463.3
TCGA-WZ-A7V3-01A	20 years, male, white, stage:i, alive, 753 days	459.7
TCGA-VF-A8AD-01A	36 years, male, white, stage:ib, alive, 1006 days	456.9
TCGA-YU-AA61-01A	29 years, male, white, stage:is, alive, 864 days	450.0
TCGA-XY-A8S3-01B	24 years, male, white, stage:is, alive, 843 days	449.7
TCGA-2G-AAH2-01A	20 years, male, white, stage:is, alive, 6060 days	436.9
TCGA-2G-AAL5-01A	31 years, male, white, stage:i, alive, 7437 days	436.7
TCGA-SN-A84W-01A	30 years, male, white, stage:is, alive, 293 days	436.7
TCGA-2G-AAGX-01A	22 years, male, white, stage:ia, alive, 5514 days	434.1
TCGA-XE-AANI-01A	37 years, male, white, stage:is, alive, 1041 days	431.0
TCGA-2G-AAGJ-01A	28 years, male, black or african american, stage:ia, alive, 2938 days	426.0
TCGA-2G-AAGC-01A	28 years, male, white, stage:is, alive, 2585 days	422.0
TCGA-YU-A94D-01A	28 years, male, stage:iiib, alive, 2167 days	421.6
TCGA-2X-A9D6-01A	42 years, male, white, stage:i, alive, 607 days	416.4
TCGA-2G-AAKM-01A	14 years, male, white, stage:ii, dead, 6972 days	414.9
TCGA-2G-AAG5-01A	36 years, male, white, stage:is, alive, 2299 days	403.3
TCGA-2G-AAG6-01A	24 years, male, white, stage:is, alive, 2231 days	401.8
TCGA-2G-AAFZ-01A	32 years, male, white, stage:iii, alive, 1353 days	385.7
TCGA-2G-AAGT-01A	30 years, male, white, stage:is, alive, 4406 days	375.9
TCGA-2G-AAFV-01A	31 years, male, white, stage:is, alive, 1389 days	364.0
TCGA-2G-AAGG-01A	20 years, male, white, stage:iiic, alive, 2611 days	346.7
TCGA-2G-AAG0-01A	23 years, male, white, stage:is, alive, 1529 days	346.4
TCGA-2G-AAG7-01A	33 years, male, white, stage:is, alive, 2475 days	330.6
TCGA-W4-A7U3-01A	26 years, male, white, alive, 149 days	327.3
TCGA-2G-AAGM-01A	51 years, male, white, stage:is, alive, 3891 days	311.5
TCGA-2G-AAGI-01A	33 years, male, white, stage:is, alive, 3137 days	305.8
TCGA-2G-AAGP-01A	33 years, male, white, stage:iia, alive, 4018 days	298.2
TCGA-XE-AAOC-01A	31 years, male, white, stage:ia, alive, 270 days	296.4
TCGA-2G-AAGY-01A	28 years, male, white, stage:is, alive, 5329 days	289.1
TCGA-2G-AAGS-01A	39 years, male, white, stage:iiib, alive, 4816 days	281.0
TCGA-YU-A94I-01A	66 years, male, stage:ia, alive, 536 days	198.8
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TESTIS CANCER - Protein expressionⁱ

Pending cancer tissue analysis