HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.4 nTPM
HPA:15.4 nTPM
GTEx:15.4 nTPM
FANTOM5:45.0 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:48.9 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027982Antibody HPA028151
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.4
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
1898 Male, age 80, left hemisphere 15.9
1855 Male, age 76, left hemisphere 13.2
2529 Female, age 94, left hemisphere 13.0
2621 Female, age 67, right hemisphere 12.1
1911 Female, age 85, right hemisphere 12.0
2148 Female, age 91, left hemisphere 11.9
Dentate gyrus
nTPM: 12.9
2010 Male, age 76, both hemispheres 14.2
1927 Female, age 91, both hemispheres 14.1
2528 Male, age 74, both hemispheres 12.9
2246 Female, age 85, both hemispheres 12.4
2530 Female, age 94, left hemisphere 12.1
2531 Female, age 67, both hemispheres 11.8
Entorhinal gyrus
nTPM: 14.1
2764 Male, age 80, right hemisphere 15.5
1938 Female, age 85, left hemisphere 14.8
2613 Female, age 94, left hemisphere 14.8
1787 Male, age 76, left hemisphere 14.3
2117 Female, age 91, right hemisphere 12.6
2686 Male, age 75, right hemisphere 12.4
Hippocampus, CA1
nTPM: 14.6
2749 Male, age 80, left hemisphere 19.7
1873 Female, age 85, both hemispheres 13.8
2045 Male, age 76, both hemispheres 13.3
2527 Male, age 74, both hemispheres 13.2
2082 Female, age 91, right hemisphere 13.0
Hippocampus, CA2
nTPM: 13.6
1963 Male, age 80, left hemisphere 15.3
1892 Male, age 76, both hemispheres 15.1
2437 Female, age 94, left hemisphere 13.4
2249 Male, age 74, both hemispheres 13.0
2113 Female, age 91, right hemisphere 12.9
1940 Female, age 85, left hemisphere 12.1
Hippocampus, CA3
nTPM: 13.8
2137 Male, age 80, left hemisphere 16.2
1867 Male, age 76, both hemispheres 14.7
1891 Female, age 85, both hemispheres 13.8
2620 Female, age 94, left hemisphere 13.8
2436 Male, age 74, both hemispheres 13.5
2861 Female, age 67, both hemispheres 11.2
Parahippocampal cortex
nTPM: 14.2
1850 Male, age 80, both hemispheres 18.0
1990 Female, age 91, right hemisphere 15.4
2532 Female, age 72, left hemisphere 14.7
2693 Female, age 94, both hemispheres 14.5
1933 Female, age 85, both hemispheres 14.4
2250 Female, age 67, right hemisphere 13.7
2018 Male, age 76, both hemispheres 13.1
2245 Female, age 91, both hemispheres 13.0
2692 Male, age 74, both hemispheres 12.9
2622 Female, age 67, right hemisphere 12.3
Perirhinal gyrus
nTPM: 15.4
1847 Female, age 91, left hemisphere 17.0
1794 Male, age 80, right hemisphere 16.2
1841 Female, age 85, right hemisphere 14.8
2521 Female, age 94, right hemisphere 14.4
2848 Male, age 76, right hemisphere 14.4
Subiculum
nTPM: 13.1
1977 Female, age 85, both hemispheres 14.6
1901 Male, age 80, both hemispheres 14.5
2619 Male, age 74, both hemispheres 13.0
2729 Female, age 91, right hemisphere 12.6
2042 Male, age 76, both hemispheres 12.3
2438 Female, age 94, left hemisphere 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.4
Samples: 197

Max nTPM: 29.3
Min nTPM: 8.4
Std nTPM: 4.1
Median nTPM: 14.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 29.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 26.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 26.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 25.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 24.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 24.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 24.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 23.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 23.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 23.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.0
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 33.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 25.5
Min nTPM: 14.6
Sample A Female 25.5
Sample B Female 16.0
Sample C Male 18.2
Sample D Male 14.6
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 21.4
Min nTPM: 14.4
Sample A Female 19.8
Sample B Female 21.4
Sample C Male 18.8
Sample D Male 14.4
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 24.1
Min nTPM: 15.5
Sample A Female 24.1
Sample B Female 16.3
Sample C Male 15.9
Sample D Male 15.5
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 19.8
Min nTPM: 13.6
Sample A Female 19.8
Sample B Female 13.6
Sample C Male 18.0
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.0
Samples: 4

Max nTPM: 52.0
Min nTPM: 43.7
Sample A Male 48.0
Sample B Male 52.0
Sample C Female 43.7
Sample D Female 44.4
Hippocampal formation
nTPM: 48.9
Samples: 4

Max nTPM: 58.1
Min nTPM: 42.3
Sample A Male 58.1
Sample B Male 49.2
Sample C Female 46.0
Sample D Female 42.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
583850 Antisense, RP_040831_01_B01, Mouse strain C57BL/6J (56 days, male) 8.1

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