HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:73.1 nTPM
HPA:73.1 nTPM
GTEx:76.4 nTPM
FANTOM5:723.1 Scaled Tags Per Million
Pig:124.5 nTPM
Mouse:290.2 nTPM
Allen mouse:25.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063238
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.5
1898 Male, age 80, left hemisphere 59.1
2621 Female, age 67, right hemisphere 45.9
2148 Female, age 91, left hemisphere 26.0
1855 Male, age 76, left hemisphere 25.0
2529 Female, age 94, left hemisphere 22.9
1911 Female, age 85, right hemisphere 22.2
Dentate gyrus
nTPM: 40.7
1927 Female, age 91, both hemispheres 82.4
2531 Female, age 67, both hemispheres 40.8
2246 Female, age 85, both hemispheres 38.7
2010 Male, age 76, both hemispheres 34.0
2528 Male, age 74, both hemispheres 24.7
2530 Female, age 94, left hemisphere 23.6
Entorhinal gyrus
nTPM: 29.0
1938 Female, age 85, left hemisphere 54.2
2764 Male, age 80, right hemisphere 45.0
1787 Male, age 76, left hemisphere 31.3
2613 Female, age 94, left hemisphere 19.7
2686 Male, age 75, right hemisphere 13.6
2117 Female, age 91, right hemisphere 10.2
Hippocampus, CA1
nTPM: 45.5
2749 Male, age 80, left hemisphere 89.1
1873 Female, age 85, both hemispheres 52.1
2527 Male, age 74, both hemispheres 34.5
2045 Male, age 76, both hemispheres 32.2
2082 Female, age 91, right hemisphere 19.4
Hippocampus, CA2
nTPM: 34.8
1892 Male, age 76, both hemispheres 60.9
1963 Male, age 80, left hemisphere 48.1
1940 Female, age 85, left hemisphere 30.5
2249 Male, age 74, both hemispheres 30.5
2437 Female, age 94, left hemisphere 23.3
2113 Female, age 91, right hemisphere 15.5
Hippocampus, CA3
nTPM: 40.7
2137 Male, age 80, left hemisphere 56.2
2436 Male, age 74, both hemispheres 49.9
2620 Female, age 94, left hemisphere 41.1
1867 Male, age 76, both hemispheres 39.7
1891 Female, age 85, both hemispheres 33.6
2861 Female, age 67, both hemispheres 23.5
Parahippocampal cortex
nTPM: 41.7
1850 Male, age 80, both hemispheres 72.8
1990 Female, age 91, right hemisphere 54.1
1933 Female, age 85, both hemispheres 52.2
2245 Female, age 91, both hemispheres 49.5
2250 Female, age 67, right hemisphere 48.5
2532 Female, age 72, left hemisphere 39.0
2693 Female, age 94, both hemispheres 37.6
2622 Female, age 67, right hemisphere 27.8
2018 Male, age 76, both hemispheres 23.8
2692 Male, age 74, both hemispheres 11.2
Perirhinal gyrus
nTPM: 73.1
1847 Female, age 91, left hemisphere 94.6
1841 Female, age 85, right hemisphere 77.6
1794 Male, age 80, right hemisphere 72.8
2521 Female, age 94, right hemisphere 72.0
2848 Male, age 76, right hemisphere 48.4
Subiculum
nTPM: 25.4
1977 Female, age 85, both hemispheres 48.1
1901 Male, age 80, both hemispheres 38.3
2438 Female, age 94, left hemisphere 25.9
2619 Male, age 74, both hemispheres 18.1
2042 Male, age 76, both hemispheres 12.0
2729 Female, age 91, right hemisphere 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.4
Samples: 197

Max nTPM: 230.4
Min nTPM: 19.1
Std nTPM: 40.0
Median nTPM: 64.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 230.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 189.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 178.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 168.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 165.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 162.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 162.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 158.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 153.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 152.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 149.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 723.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 723.1
FF:10169-103B7 60 years, female 1079.8
FF:10153-102I9 76 years, female 366.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 124.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 118.2
Samples: 4

Max nTPM: 138.7
Min nTPM: 87.3
Sample A Female 127.0
Sample B Female 119.9
Sample C Male 138.7
Sample D Male 87.3
Entorhinal cortex
nTPM: 124.5
Samples: 4

Max nTPM: 146.4
Min nTPM: 112.4
Sample A Female 125.5
Sample B Female 146.4
Sample C Male 113.6
Sample D Male 112.4
Subiculum
nTPM: 108.1
Samples: 4

Max nTPM: 130.0
Min nTPM: 96.8
Sample A Female 130.0
Sample B Female 96.8
Sample C Male 106.4
Sample D Male 99.2
Ventral hippocampus
nTPM: 105.7
Samples: 4

Max nTPM: 122.1
Min nTPM: 83.3
Sample A Female 122.1
Sample B Female 83.3
Sample C Male 107.4
Sample D Male 109.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 290.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 290.2
Samples: 4

Max nTPM: 320.0
Min nTPM: 277.2
Sample A Male 283.9
Sample B Male 279.5
Sample C Female 277.2
Sample D Female 320.0
Hippocampal formation
nTPM: 271.7
Samples: 4

Max nTPM: 289.0
Min nTPM: 252.3
Sample A Male 252.3
Sample B Male 289.0
Sample C Female 287.9
Sample D Female 257.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.8
70431259 Antisense, RP_050614_02_E02, Mouse strain C57BL/6J (56 days, male) 25.8

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