HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.1 nTPM
HPA:19.1 nTPM
GTEx:22.8 nTPM
FANTOM5:44.8 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:48.1 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031020Antibody HPA031021
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.1
Sample id Sample description nTPM
Hippocampus
nTPM: 16.7
2621 Female, age 67, right hemisphere 19.4
2529 Female, age 94, left hemisphere 17.5
1911 Female, age 85, right hemisphere 16.1
1855 Male, age 76, left hemisphere 15.8
2148 Female, age 91, left hemisphere 15.8
1898 Male, age 80, left hemisphere 15.3
Dentate gyrus
nTPM: 16.8
2531 Female, age 67, both hemispheres 19.3
2246 Female, age 85, both hemispheres 18.9
1927 Female, age 91, both hemispheres 17.3
2010 Male, age 76, both hemispheres 16.4
2530 Female, age 94, left hemisphere 16.3
2528 Male, age 74, both hemispheres 12.4
Entorhinal gyrus
nTPM: 17.9
2686 Male, age 75, right hemisphere 22.7
2613 Female, age 94, left hemisphere 21.9
1787 Male, age 76, left hemisphere 17.9
1938 Female, age 85, left hemisphere 17.2
2764 Male, age 80, right hemisphere 16.2
2117 Female, age 91, right hemisphere 11.7
Hippocampus, CA1
nTPM: 19.1
2749 Male, age 80, left hemisphere 24.2
2082 Female, age 91, right hemisphere 18.9
1873 Female, age 85, both hemispheres 18.2
2045 Male, age 76, both hemispheres 17.9
2527 Male, age 74, both hemispheres 16.4
Hippocampus, CA2
nTPM: 16.5
1892 Male, age 76, both hemispheres 18.1
2437 Female, age 94, left hemisphere 17.8
2249 Male, age 74, both hemispheres 16.7
2113 Female, age 91, right hemisphere 16.2
1963 Male, age 80, left hemisphere 15.4
1940 Female, age 85, left hemisphere 14.9
Hippocampus, CA3
nTPM: 18.2
2436 Male, age 74, both hemispheres 24.3
2137 Male, age 80, left hemisphere 22.6
2861 Female, age 67, both hemispheres 17.2
2620 Female, age 94, left hemisphere 16.2
1867 Male, age 76, both hemispheres 15.5
1891 Female, age 85, both hemispheres 13.8
Parahippocampal cortex
nTPM: 17.8
2622 Female, age 67, right hemisphere 21.6
2250 Female, age 67, right hemisphere 19.3
2245 Female, age 91, both hemispheres 19.0
2693 Female, age 94, both hemispheres 18.8
1990 Female, age 91, right hemisphere 17.7
2532 Female, age 72, left hemisphere 17.6
1933 Female, age 85, both hemispheres 17.0
2692 Male, age 74, both hemispheres 16.0
2018 Male, age 76, both hemispheres 15.4
1850 Male, age 80, both hemispheres 15.3
Perirhinal gyrus
nTPM: 17.1
1847 Female, age 91, left hemisphere 18.5
2848 Male, age 76, right hemisphere 18.3
1794 Male, age 80, right hemisphere 16.8
1841 Female, age 85, right hemisphere 16.4
2521 Female, age 94, right hemisphere 15.7
Subiculum
nTPM: 16.2
2438 Female, age 94, left hemisphere 21.8
1901 Male, age 80, both hemispheres 16.7
1977 Female, age 85, both hemispheres 16.3
2619 Male, age 74, both hemispheres 15.1
2042 Male, age 76, both hemispheres 13.5
2729 Female, age 91, right hemisphere 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.8
Samples: 197

Max nTPM: 44.6
Min nTPM: 5.4
Std nTPM: 6.9
Median nTPM: 22.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 42.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 40.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 39.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 37.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 36.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 35.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 34.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 34.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 34.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.8
FF:10153-102I9 76 years, female 45.6
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 10.2
Min nTPM: 8.1
Sample A Female 10.1
Sample B Female 10.2
Sample C Male 8.1
Sample D Male 9.7
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.9
Sample A Female 11.5
Sample B Female 9.9
Sample C Male 9.9
Sample D Male 11.0
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.9
Sample A Female 9.9
Sample B Female 7.9
Sample C Male 9.3
Sample D Male 9.1
Ventral hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.2
Sample A Female 9.4
Sample B Female 8.2
Sample C Male 11.5
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 42.9
Min nTPM: 36.5
Sample A Male 40.4
Sample B Male 36.5
Sample C Female 41.3
Sample D Female 42.9
Hippocampal formation
nTPM: 48.1
Samples: 4

Max nTPM: 53.5
Min nTPM: 43.5
Sample A Male 43.5
Sample B Male 48.6
Sample C Female 53.5
Sample D Female 46.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
68191396 Antisense, RP_041129_01_B01, Mouse strain C57BL/6J (56 days, male) 8.6

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