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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:21.7 nTPM
HPA:21.7 nTPM
GTEx:35.3 nTPM
FANTOM5:51.1 Scaled Tags Per Million
Pig:23.8 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 21.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 20.1
2048 Male, age 55, midline 22.4
1981 Female, age 72, midline 21.8
2816 Male, age 47, midline 20.4
2194 Female, age 79, both hemispheres 19.5
2565 Male, age 75, midline 16.5
Cervical spinal cord, dorsal horn
nTPM: 21.7
2296 Male, age 66, both hemispheres 26.5
2173 Female, age 72, unknown 25.6
2069 Male, age 47, both hemispheres 22.0
1877 Male, age 55, unknown 21.5
2297 Male, age 75, both hemispheres 17.3
2721 Male, age 90, both hemispheres 17.3
Cervical spinal cord, ventral horn
nTPM: 19.8
2098 Female, age 72, unknown 23.8
2068 Male, age 55, unknown 20.2
2295 Male, age 66, both hemispheres 20.0
2820 Female, age 79, both hemispheres 18.7
2809 Male, age 90, both hemispheres 18.6
2480 Male, age 75, both hemispheres 17.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 35.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 35.3
Samples: 159

Max nTPM: 52.9
Min nTPM: 16.0
Std nTPM: 8.5
Median nTPM: 35.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 52.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 52.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 52.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 51.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 51.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 50.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 50.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 48.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 48.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 48.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 48.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 47.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 47.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 47.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 47.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 46.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 46.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 46.7
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 46.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 46.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 46.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 45.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 45.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 45.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 44.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 44.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 44.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 44.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 43.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 43.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 43.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 43.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 42.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 42.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 42.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 41.8
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 41.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 41.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 41.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 41.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 40.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 40.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 40.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 40.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 40.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 39.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 39.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 39.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 39.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 39.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 39.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 39.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 39.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 39.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 39.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 38.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 38.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 38.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 38.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 38.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 38.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 38.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 38.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 38.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 37.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 37.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 37.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 37.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 37.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 37.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 36.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 36.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 36.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 36.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 36.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 36.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 36.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 36.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 36.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 35.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 35.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 35.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 35.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 35.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 35.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 35.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 34.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 34.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 34.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 34.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 34.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 33.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 33.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 33.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 33.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 33.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 33.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 32.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 32.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 32.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 32.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 32.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 32.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 31.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 31.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 31.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 31.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 31.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 30.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 30.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 30.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 30.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 29.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 29.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 29.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 29.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 29.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 29.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 29.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 29.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 28.6
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 28.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 28.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 28.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 28.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 28.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 27.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 27.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 27.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 26.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 26.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 25.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 25.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 25.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 25.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 25.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 25.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 25.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 24.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 24.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 24.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 24.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 23.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 23.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 22.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 22.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 22.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 22.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 21.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 21.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 21.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 21.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 21.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 20.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 19.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 18.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 18.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 17.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 16.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 51.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 51.1
FF:10159-103A6 76 years, female 54.8
FF:10181-103D1 60 years, female 47.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 23.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 21.6
Samples: 4

Max nTPM: 23.5
Min nTPM: 18.9
Sample A Female 21.4
Sample B Female 23.5
Sample C Male 22.4
Sample D Male 18.9
Ventral spinal cord
nTPM: 23.8
Samples: 4

Max nTPM: 27.3
Min nTPM: 21.1
Sample A Female 25.4
Sample B Female 27.3
Sample C Male 21.1
Sample D Male 21.3

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