HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.0 nTPM
HPA:36.0 nTPM
GTEx:34.0 nTPM
FANTOM5:100.7 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:25.4 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038076
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.0
Sample id Sample description nTPM
Hippocampus
nTPM: 33.7
1898 Male, age 80, left hemisphere 37.9
2529 Female, age 94, left hemisphere 36.1
1911 Female, age 85, right hemisphere 33.8
2148 Female, age 91, left hemisphere 33.1
1855 Male, age 76, left hemisphere 31.9
2621 Female, age 67, right hemisphere 29.6
Dentate gyrus
nTPM: 30.2
2528 Male, age 74, both hemispheres 36.3
1927 Female, age 91, both hemispheres 34.1
2246 Female, age 85, both hemispheres 29.9
2010 Male, age 76, both hemispheres 27.8
2531 Female, age 67, both hemispheres 27.3
2530 Female, age 94, left hemisphere 25.7
Entorhinal gyrus
nTPM: 33.2
1938 Female, age 85, left hemisphere 40.4
2117 Female, age 91, right hemisphere 35.3
2764 Male, age 80, right hemisphere 33.2
2686 Male, age 75, right hemisphere 32.4
1787 Male, age 76, left hemisphere 29.2
2613 Female, age 94, left hemisphere 28.7
Hippocampus, CA1
nTPM: 32.6
1873 Female, age 85, both hemispheres 35.1
2749 Male, age 80, left hemisphere 35.0
2527 Male, age 74, both hemispheres 33.6
2082 Female, age 91, right hemisphere 30.3
2045 Male, age 76, both hemispheres 29.0
Hippocampus, CA2
nTPM: 33.2
1963 Male, age 80, left hemisphere 42.0
1892 Male, age 76, both hemispheres 33.7
2113 Female, age 91, right hemisphere 33.5
1940 Female, age 85, left hemisphere 30.2
2437 Female, age 94, left hemisphere 30.0
2249 Male, age 74, both hemispheres 29.6
Hippocampus, CA3
nTPM: 30.4
1891 Female, age 85, both hemispheres 36.7
2436 Male, age 74, both hemispheres 36.2
2137 Male, age 80, left hemisphere 33.4
1867 Male, age 76, both hemispheres 28.2
2861 Female, age 67, both hemispheres 24.1
2620 Female, age 94, left hemisphere 23.9
Parahippocampal cortex
nTPM: 34.1
2692 Male, age 74, both hemispheres 41.1
1850 Male, age 80, both hemispheres 40.2
2693 Female, age 94, both hemispheres 38.0
1933 Female, age 85, both hemispheres 37.8
2622 Female, age 67, right hemisphere 33.6
1990 Female, age 91, right hemisphere 32.7
2250 Female, age 67, right hemisphere 31.4
2245 Female, age 91, both hemispheres 30.2
2532 Female, age 72, left hemisphere 30.0
2018 Male, age 76, both hemispheres 25.7
Perirhinal gyrus
nTPM: 36.0
2521 Female, age 94, right hemisphere 39.0
1847 Female, age 91, left hemisphere 38.2
1841 Female, age 85, right hemisphere 37.1
1794 Male, age 80, right hemisphere 33.4
2848 Male, age 76, right hemisphere 32.4
Subiculum
nTPM: 34.4
2619 Male, age 74, both hemispheres 38.1
1901 Male, age 80, both hemispheres 36.5
2438 Female, age 94, left hemisphere 35.9
2729 Female, age 91, right hemisphere 34.8
1977 Female, age 85, both hemispheres 34.4
2042 Male, age 76, both hemispheres 26.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.0
Samples: 197

Max nTPM: 57.4
Min nTPM: 16.3
Std nTPM: 6.5
Median nTPM: 33.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 57.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 51.6
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 50.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 49.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 48.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 46.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 46.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 45.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 44.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 44.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 44.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.7
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 97.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 25.9
Min nTPM: 19.5
Sample A Female 23.4
Sample B Female 23.1
Sample C Male 25.9
Sample D Male 19.5
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 24.6
Min nTPM: 22.1
Sample A Female 24.3
Sample B Female 24.3
Sample C Male 24.6
Sample D Male 22.1
Subiculum
nTPM: 25.5
Samples: 4

Max nTPM: 28.7
Min nTPM: 23.8
Sample A Female 28.7
Sample B Female 23.8
Sample C Male 25.0
Sample D Male 24.5
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 25.5
Min nTPM: 19.6
Sample A Female 25.5
Sample B Female 21.0
Sample C Male 19.6
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 30.6
Min nTPM: 22.2
Sample A Male 25.5
Sample B Male 23.4
Sample C Female 22.2
Sample D Female 30.6
Hippocampal formation
nTPM: 19.8
Samples: 4

Max nTPM: 25.2
Min nTPM: 15.0
Sample A Male 15.1
Sample B Male 23.8
Sample C Female 25.2
Sample D Female 15.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
68845592 Antisense, RP_050224_02_B04, Mouse strain C57BL/6J (56 days, male) 5.5

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