COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.0 nTPM
HPA:20.3 nTPM
GTEx:37.0 nTPM
FANTOM5:52.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA004729Antibody HPA012873
Endothelial cells MediumMedium
Glandular cells LowMedium
Peripheral nerve/ganglion MediumHigh



COLON - HPA RNA-seqi
Average nTPM 20.3
overview
Male, age 54 		Colon sample 67
nTPM: 22.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 20.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 10.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 23.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 21.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 13.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 17.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 38.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 15.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 22.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 29.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 17.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 37.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 37.0
Samples: 373

Max nTPM: 78.1
Min nTPM: 4.2
Std nTPM: 14.5
Median nTPM: 36.3
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 78.1
GTEX-18A66-2626-SM-72D67 60-69 years, male 75.0
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 72.5
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 71.8
GTEX-183FY-1426-SM-7DHLM 20-29 years, male 70.6
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 69.8
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 69.5
GTEX-15DYW-2426-SM-7KUG8 60-69 years, female 68.4
GTEX-1H1E6-1826-SM-A9G21 30-39 years, male 66.4
GTEX-14AS3-1026-SM-5TDD7 40-49 years, female 66.3
GTEX-1KXAM-1926-SM-D3LAG 60-69 years, male 65.7
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Colon - Transverse
Average nTPM: 18.6
Samples: 406

Max nTPM: 59.8
Min nTPM: 2.3
Std nTPM: 11.7
Median nTPM: 15.0
GTEX-1QW4Y-1326-SM-EWRMZ 30-39 years, male 59.8
GTEX-1CB4F-2026-SM-79OLU 60-69 years, male 55.6
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 54.1
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 50.7
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 50.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 49.0
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 49.0
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 46.5
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 45.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 44.8
GTEX-14DAQ-2726-SM-5S2QY 60-69 years, female 44.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 52.7
FF:10014-101C5 62,83,84 years, mixed 52.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.