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GABARAPL1
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:90.9 nTPM
HPA:90.9 nTPM
GTEx:105.2 nTPM
FANTOM5:150.2 Scaled Tags Per Million
Pig:238.1 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 90.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 90.9
2194 Female, age 79, both hemispheres 121.3
1981 Female, age 72, midline 92.4
2565 Male, age 75, midline 88.2
2048 Male, age 55, midline 77.3
2816 Male, age 47, midline 75.2
Cervical spinal cord, dorsal horn
nTPM: 85.6
2173 Female, age 72, unknown 108.9
2297 Male, age 75, both hemispheres 105.8
1877 Male, age 55, unknown 81.1
2296 Male, age 66, both hemispheres 74.8
2069 Male, age 47, both hemispheres 73.7
2721 Male, age 90, both hemispheres 69.3
Cervical spinal cord, ventral horn
nTPM: 81.3
2820 Female, age 79, both hemispheres 117.0
2068 Male, age 55, unknown 104.7
2098 Female, age 72, unknown 76.4
2809 Male, age 90, both hemispheres 74.5
2480 Male, age 75, both hemispheres 60.4
2295 Male, age 66, both hemispheres 54.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 105.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 105.2
Samples: 159

Max nTPM: 249.3
Min nTPM: 60.9
Std nTPM: 31.7
Median nTPM: 99.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 249.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 230.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 229.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 199.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 199.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 177.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 173.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 167.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 165.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 157.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 156.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 154.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 154.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 151.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 145.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 143.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 142.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 140.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 139.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 138.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 137.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 135.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 134.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 133.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 132.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 128.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 126.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 126.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 124.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 123.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 122.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 118.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 118.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 117.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 116.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 115.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 115.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 115.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 114.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 113.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 113.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 113.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 112.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 112.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 111.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 111.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 111.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 110.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 110.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 110.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 110.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 109.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 109.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 108.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 108.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 106.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 106.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 105.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 105.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 104.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 103.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 103.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 103.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 102.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 102.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 101.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 101.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 101.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 101.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 100.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 100.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 100.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 100.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 100.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 100.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 99.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 99.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 99.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 99.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 99.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 98.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 98.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 98.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 98.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 98.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 98.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 98.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 97.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 97.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 97.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 96.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 96.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 96.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 95.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 93.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 92.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 92.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 92.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 92.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 91.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 91.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 90.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 90.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 90.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 89.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 89.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 89.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 88.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 87.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 87.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 87.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 86.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 86.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 85.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 85.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 85.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 85.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 85.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 84.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 84.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 84.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 84.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 83.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 83.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 83.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 82.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 82.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 82.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 82.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 82.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 81.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 81.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 81.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 80.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 80.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 79.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 79.2
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 78.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 78.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 76.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 76.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 76.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 74.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 74.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 73.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 72.7
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 71.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 70.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 69.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 68.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 68.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 67.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 67.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 67.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 66.7
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 66.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 65.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 65.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 60.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 150.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 150.2
FF:10181-103D1 60 years, female 183.1
FF:10159-103A6 76 years, female 117.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 238.1
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 201.4
Samples: 4

Max nTPM: 238.8
Min nTPM: 171.0
Sample A Female 238.8
Sample B Female 174.0
Sample C Male 171.0
Sample D Male 221.9
Ventral spinal cord
nTPM: 238.1
Samples: 4

Max nTPM: 244.1
Min nTPM: 227.5
Sample A Female 240.4
Sample B Female 244.1
Sample C Male 240.5
Sample D Male 227.5

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