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GABARAPL1
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  • GABARAPL1
BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:327.0 nTPM
GTEx:327.0 nTPM
FANTOM5:206.8 Scaled Tags Per Million
Pig:121.3 nTPM
Mouse:507.4 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 327.0
GTEx sample id Sample description nTPM
Retina
Average nTPM: 327.0
Samples: 105

Max nTPM: 597.2
Min nTPM: 198.4
Std nTPM: 62.3
Median nTPM:
495_1 57 years, female 597.2
491_1 89 years, female 449.7
139_1 64 years, female 444.9
2_1 77 years, female 443.3
117_1 61 years, male 438.1
490_1 67 years, female 435.9
322_1 76 years, male 432.8
415_1 77 years, female 427.2
35_1 74 years, female 417.6
324_1 76 years, male 414.1
315_1 62 years, female 411.8
119_1 70 years, female 399.3
43_1 64 years, female 396.9
311_1 78 years, male 395.0
307_1 66 years, female 394.2
317_1 60 years, male 393.7
162_1 79 years, female 392.9
126_1 63 years, male 382.9
466_1 57 years, female 377.9
145_1 84 years, male 377.3
447_1 81 years, male 377.3
413_1 59 years, female 376.0
6_1 73 years, female 374.0
237_1 82 years, male 373.8
17_1 71 years, male 364.7
229_1 69 years, female 361.7
379_1 60 years, male 359.9
313_1 79 years, female 359.2
396_1 62 years, male 357.7
384_1 83 years, male 356.6
137_1 83 years, male 353.8
347_1 72 years, male 348.7
41_1 94 years, female 346.3
149_1 88 years, male 344.1
316_1 62 years, male 342.8
414_1 84 years, female 342.4
386_1 76 years, male 340.5
189_1 76 years, male 338.4
109_1 81 years, female 337.2
288_1 66 years, female 337.0
501_1 88 years, male 336.1
81_1 67 years, male 335.7
89_1 63 years, male 335.6
173_1 67 years, male 335.6
4_1 88 years, female 335.5
348_1 84 years, male 335.3
218_1 71 years, female 335.2
153_1 70 years, female 334.0
405_1 91 years, male 331.6
526_1 61 years, male 328.0
377_1 82 years, female 327.9
266_1 85 years, male 324.2
321_1 62 years, female 320.4
115_1 83 years, male 320.3
375_1 74 years, female 316.2
142_1 61 years, female 315.2
499_1 55 years, female 314.9
18_1 88 years, male 314.3
480_1 63 years, male 314.2
293_1 68 years, female 311.9
308_1 70 years, female 310.7
9_1 66 years, female 310.6
518_1 75 years, female 308.8
120_1 70 years, female 306.6
389_1 86 years, female 306.3
32_1 67 years, male 304.6
251_1 78 years, male 302.4
319_1 81 years, male 301.1
320_1 89 years, female 300.1
350_1 84 years, female 299.3
335_1 73 years, female 299.1
99_1 64 years, male 298.4
394_1 75 years, female 296.6
425_1 59 years, female 295.5
404_1 82 years, female 295.4
217_1 76 years, male 293.6
254_1 77 years, female 293.0
353_1 82 years, female 290.0
468_1 89 years, male 289.9
42_1 85 years, male 286.3
265_1 87 years, male 282.2
376_1 75 years, female 282.1
406_1 79 years, male 279.5
291_1 76 years, male 278.9
172_1 72 years, female 277.9
246_1 77 years, male 276.4
452_1 88 years, female 273.5
286_1 68 years, female 269.4
177_1 74 years, male 268.2
354_1 81 years, female 267.8
314_1 67 years, male 257.1
318_1 68 years, male 255.3
264_1 73 years, female 254.8
243_1 75 years, male 254.4
295_1 61 years, female 244.5
352_1 62 years, male 243.0
292_1 71 years, male 242.1
351_1 91 years, male 241.8
163_1 78 years, male 241.7
517_1 88 years, male 241.4
349_1 83 years, male 234.0
503_1 68 years, male 226.7
355_1 70 years, female 211.8
506_1 65 years, male 211.3
356_1 87 years, female 198.4
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 206.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 206.8
FF:10030-101E3 24-65 years, mixed 206.8

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 121.3
Pig sample Sample description nTPM
Retina
nTPM: 121.3
Samples: 4

Max nTPM: 135.1
Min nTPM: 106.7
Sample A Female 120.1
Sample B Female 135.1
Sample C Male 123.4
Sample D Male 106.7

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 507.4
Mouse sample Sample description nTPM
Retina
nTPM: 507.4
Samples: 4

Max nTPM: 552.3
Min nTPM: 468.3
Sample A Male 552.3
Sample B Male 483.2
Sample C Female 468.3
Sample D Female 525.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.