HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.8 nTPM
HPA:59.8 nTPM
GTEx:77.7 nTPM
FANTOM5:112.3 Scaled Tags Per Million
Pig:90.6 nTPM
Mouse:113.9 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010631
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.8
Sample id Sample description nTPM
Hippocampus
nTPM: 37.6
2621 Female, age 67, right hemisphere 75.0
2148 Female, age 91, left hemisphere 49.2
1855 Male, age 76, left hemisphere 33.9
1898 Male, age 80, left hemisphere 29.5
2529 Female, age 94, left hemisphere 20.8
1911 Female, age 85, right hemisphere 17.0
Dentate gyrus
nTPM: 40.1
2531 Female, age 67, both hemispheres 65.3
2246 Female, age 85, both hemispheres 48.3
1927 Female, age 91, both hemispheres 41.5
2530 Female, age 94, left hemisphere 40.2
2528 Male, age 74, both hemispheres 24.4
2010 Male, age 76, both hemispheres 20.7
Entorhinal gyrus
nTPM: 59.8
2613 Female, age 94, left hemisphere 129.1
2686 Male, age 75, right hemisphere 66.0
1938 Female, age 85, left hemisphere 50.6
2764 Male, age 80, right hemisphere 49.1
1787 Male, age 76, left hemisphere 46.4
2117 Female, age 91, right hemisphere 17.5
Hippocampus, CA1
nTPM: 35.4
2045 Male, age 76, both hemispheres 53.2
2749 Male, age 80, left hemisphere 39.1
1873 Female, age 85, both hemispheres 30.2
2082 Female, age 91, right hemisphere 28.6
2527 Male, age 74, both hemispheres 25.9
Hippocampus, CA2
nTPM: 24.9
1892 Male, age 76, both hemispheres 42.3
2437 Female, age 94, left hemisphere 33.7
1940 Female, age 85, left hemisphere 25.0
2113 Female, age 91, right hemisphere 24.9
1963 Male, age 80, left hemisphere 15.4
2249 Male, age 74, both hemispheres 8.0
Hippocampus, CA3
nTPM: 50.5
2620 Female, age 94, left hemisphere 113.9
2861 Female, age 67, both hemispheres 99.7
2137 Male, age 80, left hemisphere 36.2
1867 Male, age 76, both hemispheres 25.9
1891 Female, age 85, both hemispheres 17.3
2436 Male, age 74, both hemispheres 10.1
Parahippocampal cortex
nTPM: 49.8
2622 Female, age 67, right hemisphere 97.0
2245 Female, age 91, both hemispheres 63.6
2693 Female, age 94, both hemispheres 58.4
2692 Male, age 74, both hemispheres 56.0
2532 Female, age 72, left hemisphere 42.6
1850 Male, age 80, both hemispheres 40.8
1933 Female, age 85, both hemispheres 39.8
2250 Female, age 67, right hemisphere 39.3
1990 Female, age 91, right hemisphere 37.3
2018 Male, age 76, both hemispheres 22.9
Perirhinal gyrus
nTPM: 51.1
1847 Female, age 91, left hemisphere 59.8
2848 Male, age 76, right hemisphere 53.8
1794 Male, age 80, right hemisphere 49.6
2521 Female, age 94, right hemisphere 48.9
1841 Female, age 85, right hemisphere 43.5
Subiculum
nTPM: 24.9
2619 Male, age 74, both hemispheres 45.6
1977 Female, age 85, both hemispheres 29.9
2438 Female, age 94, left hemisphere 22.6
2729 Female, age 91, right hemisphere 20.0
1901 Male, age 80, both hemispheres 19.1
2042 Male, age 76, both hemispheres 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.7
Samples: 197

Max nTPM: 168.9
Min nTPM: 4.4
Std nTPM: 40.4
Median nTPM: 77.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 168.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 167.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 162.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 161.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 156.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 156.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 153.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 150.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 147.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 147.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 146.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.3
FF:10153-102I9 76 years, female 119.0
FF:10169-103B7 60 years, female 105.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.7
Samples: 4

Max nTPM: 79.0
Min nTPM: 63.8
Sample A Female 76.0
Sample B Female 79.0
Sample C Male 64.0
Sample D Male 63.8
Entorhinal cortex
nTPM: 87.2
Samples: 4

Max nTPM: 101.0
Min nTPM: 65.3
Sample A Female 94.8
Sample B Female 65.3
Sample C Male 101.0
Sample D Male 87.6
Subiculum
nTPM: 90.6
Samples: 4

Max nTPM: 121.4
Min nTPM: 69.7
Sample A Female 121.4
Sample B Female 74.9
Sample C Male 96.4
Sample D Male 69.7
Ventral hippocampus
nTPM: 82.6
Samples: 4

Max nTPM: 117.6
Min nTPM: 62.9
Sample A Female 66.5
Sample B Female 62.9
Sample C Male 117.6
Sample D Male 83.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 113.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.9
Samples: 4

Max nTPM: 129.3
Min nTPM: 105.1
Sample A Male 115.7
Sample B Male 105.3
Sample C Female 105.1
Sample D Female 129.3
Hippocampal formation
nTPM: 103.0
Samples: 4

Max nTPM: 114.7
Min nTPM: 91.9
Sample A Male 91.9
Sample B Male 114.7
Sample C Female 98.5
Sample D Female 106.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
69531043 Antisense, RP_050426_01_B04, Mouse strain C57BL/6J (56 days, male) 9.6

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