HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:15.4 nTPM
FANTOM5:40.5 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:18.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038862
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 18.3
1911 Female, age 85, right hemisphere 21.4
2148 Female, age 91, left hemisphere 18.5
2529 Female, age 94, left hemisphere 18.5
1855 Male, age 76, left hemisphere 18.4
1898 Male, age 80, left hemisphere 16.6
2621 Female, age 67, right hemisphere 16.5
Dentate gyrus
nTPM: 18.1
2010 Male, age 76, both hemispheres 19.8
2246 Female, age 85, both hemispheres 18.0
2530 Female, age 94, left hemisphere 18.0
2528 Male, age 74, both hemispheres 17.8
2531 Female, age 67, both hemispheres 17.7
1927 Female, age 91, both hemispheres 17.6
Entorhinal gyrus
nTPM: 17.5
2117 Female, age 91, right hemisphere 21.4
2686 Male, age 75, right hemisphere 19.3
1938 Female, age 85, left hemisphere 17.2
1787 Male, age 76, left hemisphere 17.1
2613 Female, age 94, left hemisphere 16.7
2764 Male, age 80, right hemisphere 13.6
Hippocampus, CA1
nTPM: 17.3
2082 Female, age 91, right hemisphere 21.0
2527 Male, age 74, both hemispheres 19.1
1873 Female, age 85, both hemispheres 18.6
2045 Male, age 76, both hemispheres 16.0
2749 Male, age 80, left hemisphere 11.7
Hippocampus, CA2
nTPM: 18.5
2113 Female, age 91, right hemisphere 22.9
1940 Female, age 85, left hemisphere 19.4
2437 Female, age 94, left hemisphere 19.4
2249 Male, age 74, both hemispheres 18.7
1963 Male, age 80, left hemisphere 16.8
1892 Male, age 76, both hemispheres 13.7
Hippocampus, CA3
nTPM: 16.7
1891 Female, age 85, both hemispheres 21.3
2436 Male, age 74, both hemispheres 19.9
2861 Female, age 67, both hemispheres 16.4
1867 Male, age 76, both hemispheres 15.6
2137 Male, age 80, left hemisphere 14.3
2620 Female, age 94, left hemisphere 12.8
Parahippocampal cortex
nTPM: 18.5
2693 Female, age 94, both hemispheres 21.7
2692 Male, age 74, both hemispheres 21.1
2250 Female, age 67, right hemisphere 18.9
1990 Female, age 91, right hemisphere 18.6
2532 Female, age 72, left hemisphere 17.8
1850 Male, age 80, both hemispheres 17.7
2622 Female, age 67, right hemisphere 17.7
1933 Female, age 85, both hemispheres 17.3
2018 Male, age 76, both hemispheres 17.3
2245 Female, age 91, both hemispheres 16.7
Perirhinal gyrus
nTPM: 16.0
2848 Male, age 76, right hemisphere 18.0
1841 Female, age 85, right hemisphere 17.9
2521 Female, age 94, right hemisphere 16.2
1794 Male, age 80, right hemisphere 14.9
1847 Female, age 91, left hemisphere 12.7
Subiculum
nTPM: 19.7
2042 Male, age 76, both hemispheres 24.6
2729 Female, age 91, right hemisphere 20.6
2619 Male, age 74, both hemispheres 20.0
1901 Male, age 80, both hemispheres 18.4
1977 Female, age 85, both hemispheres 17.5
2438 Female, age 94, left hemisphere 17.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.4
Samples: 197

Max nTPM: 30.7
Min nTPM: 8.4
Std nTPM: 2.9
Median nTPM: 15.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 30.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 24.5
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 24.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 23.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 21.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 21.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 20.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 20.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 20.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 20.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 20.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.5
FF:10153-102I9 76 years, female 43.4
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 25.6
Min nTPM: 17.4
Sample A Female 22.4
Sample B Female 17.4
Sample C Male 25.6
Sample D Male 18.9
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.8
Sample A Female 16.6
Sample B Female 18.3
Sample C Male 16.3
Sample D Male 15.8
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 20.5
Min nTPM: 16.2
Sample A Female 18.9
Sample B Female 16.2
Sample C Male 16.2
Sample D Male 20.5
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.9
Sample A Female 21.7
Sample B Female 19.5
Sample C Male 15.9
Sample D Male 20.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.4
Sample A Male 19.1
Sample B Male 16.9
Sample C Female 16.4
Sample D Female 16.7
Hippocampal formation
nTPM: 18.8
Samples: 4

Max nTPM: 21.3
Min nTPM: 14.2
Sample A Male 14.2
Sample B Male 21.3
Sample C Female 20.5
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
77799019 Antisense, RP_070212_03_C05, Mouse strain C57BL/6J (56 days, male) 0.5

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