HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:51.3 nTPM
HPA:51.3 nTPM
GTEx:28.3 nTPM
FANTOM5:103.1 Scaled Tags Per Million
Pig:66.3 nTPM
Mouse:45.5 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
2148 Female, age 91, left hemisphere 62.6
2621 Female, age 67, right hemisphere 33.1
1911 Female, age 85, right hemisphere 24.8
1855 Male, age 76, left hemisphere 21.4
1898 Male, age 80, left hemisphere 13.4
2529 Female, age 94, left hemisphere 11.4
Dentate gyrus
nTPM: 38.3
2531 Female, age 67, both hemispheres 107.1
1927 Female, age 91, both hemispheres 60.2
2528 Male, age 74, both hemispheres 24.5
2246 Female, age 85, both hemispheres 24.3
2010 Male, age 76, both hemispheres 13.9
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 11.1
2686 Male, age 75, right hemisphere 16.4
2764 Male, age 80, right hemisphere 15.3
2613 Female, age 94, left hemisphere 14.4
1787 Male, age 76, left hemisphere 8.4
1938 Female, age 85, left hemisphere 8.1
2117 Female, age 91, right hemisphere 4.2
Hippocampus, CA1
nTPM: 31.1
2045 Male, age 76, both hemispheres 86.1
1873 Female, age 85, both hemispheres 34.1
2749 Male, age 80, left hemisphere 15.5
2527 Male, age 74, both hemispheres 12.6
2082 Female, age 91, right hemisphere 7.1
Hippocampus, CA2
nTPM: 8.3
1892 Male, age 76, both hemispheres 24.9
1940 Female, age 85, left hemisphere 8.7
2113 Female, age 91, right hemisphere 8.5
2437 Female, age 94, left hemisphere 4.7
2249 Male, age 74, both hemispheres 2.4
1963 Male, age 80, left hemisphere 0.5
Hippocampus, CA3
nTPM: 51.3
2620 Female, age 94, left hemisphere 140.5
2861 Female, age 67, both hemispheres 72.5
2137 Male, age 80, left hemisphere 32.7
1891 Female, age 85, both hemispheres 31.0
1867 Male, age 76, both hemispheres 29.5
2436 Male, age 74, both hemispheres 1.4
Parahippocampal cortex
nTPM: 15.3
2693 Female, age 94, both hemispheres 25.4
1850 Male, age 80, both hemispheres 21.3
2622 Female, age 67, right hemisphere 18.8
2245 Female, age 91, both hemispheres 18.3
1933 Female, age 85, both hemispheres 16.4
2532 Female, age 72, left hemisphere 14.9
2018 Male, age 76, both hemispheres 13.2
2692 Male, age 74, both hemispheres 12.0
2250 Female, age 67, right hemisphere 7.4
1990 Female, age 91, right hemisphere 5.8
Perirhinal gyrus
nTPM: 27.5
2521 Female, age 94, right hemisphere 31.5
1841 Female, age 85, right hemisphere 30.7
2848 Male, age 76, right hemisphere 28.6
1794 Male, age 80, right hemisphere 27.9
1847 Female, age 91, left hemisphere 18.5
Subiculum
nTPM: 12.4
2729 Female, age 91, right hemisphere 40.1
1901 Male, age 80, both hemispheres 12.4
1977 Female, age 85, both hemispheres 12.0
2619 Male, age 74, both hemispheres 8.7
2438 Female, age 94, left hemisphere 0.6
2042 Male, age 76, both hemispheres 0.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.3
Samples: 197

Max nTPM: 127.4
Min nTPM: 5.0
Std nTPM: 19.0
Median nTPM: 22.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 127.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 123.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 113.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 85.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 84.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 83.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 80.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 71.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 70.7
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 69.7
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 69.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.1
FF:10169-103B7 60 years, female 132.8
FF:10153-102I9 76 years, female 73.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 66.3
Samples: 4

Max nTPM: 100.9
Min nTPM: 47.2
Sample A Female 51.2
Sample B Female 65.9
Sample C Male 47.2
Sample D Male 100.9
Entorhinal cortex
nTPM: 51.9
Samples: 4

Max nTPM: 58.1
Min nTPM: 43.8
Sample A Female 58.1
Sample B Female 43.8
Sample C Male 53.3
Sample D Male 52.2
Subiculum
nTPM: 52.5
Samples: 4

Max nTPM: 67.5
Min nTPM: 45.6
Sample A Female 67.5
Sample B Female 46.8
Sample C Male 50.0
Sample D Male 45.6
Ventral hippocampus
nTPM: 59.9
Samples: 4

Max nTPM: 63.7
Min nTPM: 54.3
Sample A Female 59.2
Sample B Female 63.7
Sample C Male 54.3
Sample D Male 62.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.2
Samples: 4

Max nTPM: 36.1
Min nTPM: 29.3
Sample A Male 30.3
Sample B Male 29.3
Sample C Female 36.1
Sample D Female 33.2
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 51.5
Min nTPM: 40.2
Sample A Male 41.9
Sample B Male 51.5
Sample C Female 48.2
Sample D Female 40.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
71496504 Antisense, RP_050913_04_F10, Mouse strain C57BL/6J (56 days, male) 5.2

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