HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.8 nTPM
HPA:19.8 nTPM
GTEx:18.8 nTPM
FANTOM5:13.7 Scaled Tags Per Million
Pig:25.2 nTPM
Mouse:40.1 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB017566
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.8
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
2621 Female, age 67, right hemisphere 15.9
1898 Male, age 80, left hemisphere 15.0
1911 Female, age 85, right hemisphere 13.3
1855 Male, age 76, left hemisphere 13.0
2529 Female, age 94, left hemisphere 12.0
2148 Female, age 91, left hemisphere 9.9
Dentate gyrus
nTPM: 13.0
2530 Female, age 94, left hemisphere 19.6
2010 Male, age 76, both hemispheres 15.2
1927 Female, age 91, both hemispheres 12.5
2531 Female, age 67, both hemispheres 11.1
2246 Female, age 85, both hemispheres 11.0
2528 Male, age 74, both hemispheres 8.6
Entorhinal gyrus
nTPM: 11.4
1938 Female, age 85, left hemisphere 13.0
2613 Female, age 94, left hemisphere 12.6
2686 Male, age 75, right hemisphere 11.8
2764 Male, age 80, right hemisphere 11.3
1787 Male, age 76, left hemisphere 11.2
2117 Female, age 91, right hemisphere 8.4
Hippocampus, CA1
nTPM: 17.8
2749 Male, age 80, left hemisphere 34.4
2045 Male, age 76, both hemispheres 18.8
2527 Male, age 74, both hemispheres 13.1
1873 Female, age 85, both hemispheres 12.6
2082 Female, age 91, right hemisphere 9.9
Hippocampus, CA2
nTPM: 15.6
1892 Male, age 76, both hemispheres 28.6
1963 Male, age 80, left hemisphere 16.4
2249 Male, age 74, both hemispheres 14.3
2437 Female, age 94, left hemisphere 14.3
2113 Female, age 91, right hemisphere 10.0
1940 Female, age 85, left hemisphere 9.9
Hippocampus, CA3
nTPM: 19.8
1867 Male, age 76, both hemispheres 42.7
2137 Male, age 80, left hemisphere 31.5
2861 Female, age 67, both hemispheres 13.0
1891 Female, age 85, both hemispheres 12.4
2436 Male, age 74, both hemispheres 12.2
2620 Female, age 94, left hemisphere 7.1
Parahippocampal cortex
nTPM: 12.8
2532 Female, age 72, left hemisphere 15.8
1990 Female, age 91, right hemisphere 15.6
2245 Female, age 91, both hemispheres 14.5
2250 Female, age 67, right hemisphere 13.5
2018 Male, age 76, both hemispheres 13.0
1850 Male, age 80, both hemispheres 12.0
2692 Male, age 74, both hemispheres 11.4
1933 Female, age 85, both hemispheres 11.1
2622 Female, age 67, right hemisphere 10.7
2693 Female, age 94, both hemispheres 10.5
Perirhinal gyrus
nTPM: 14.0
1847 Female, age 91, left hemisphere 16.2
2521 Female, age 94, right hemisphere 15.9
2848 Male, age 76, right hemisphere 13.7
1841 Female, age 85, right hemisphere 13.1
1794 Male, age 80, right hemisphere 11.0
Subiculum
nTPM: 17.2
2042 Male, age 76, both hemispheres 36.9
1901 Male, age 80, both hemispheres 20.6
2438 Female, age 94, left hemisphere 14.3
1977 Female, age 85, both hemispheres 13.4
2619 Male, age 74, both hemispheres 10.6
2729 Female, age 91, right hemisphere 7.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.8
Samples: 197

Max nTPM: 53.8
Min nTPM: 6.1
Std nTPM: 9.3
Median nTPM: 16.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 53.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 52.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 51.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 49.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 45.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 44.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 41.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 39.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 38.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 37.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.7
FF:10153-102I9 76 years, female 15.9
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 28.7
Min nTPM: 15.6
Sample A Female 28.7
Sample B Female 17.5
Sample C Male 25.7
Sample D Male 15.6
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 29.7
Min nTPM: 20.9
Sample A Female 29.7
Sample B Female 20.9
Sample C Male 22.0
Sample D Male 28.1
Subiculum
nTPM: 14.1
Samples: 4

Max nTPM: 18.6
Min nTPM: 9.8
Sample A Female 18.6
Sample B Female 9.8
Sample C Male 13.2
Sample D Male 14.7
Ventral hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 38.7
Min nTPM: 9.1
Sample A Female 9.8
Sample B Female 9.1
Sample C Male 15.8
Sample D Male 38.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 61.4
Min nTPM: 26.9
Sample A Male 40.9
Sample B Male 61.4
Sample C Female 26.9
Sample D Female 30.1
Hippocampal formation
nTPM: 40.1
Samples: 4

Max nTPM: 43.2
Min nTPM: 38.5
Sample A Male 39.0
Sample B Male 43.2
Sample C Female 39.8
Sample D Female 38.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
75650864 Antisense, RP_060518_02_E05, Mouse strain C57BL/6J (56 days, male) 4.8
79632277 Antisense, RP_071204_01_B11, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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