HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.0 nTPM
HPA:14.0 nTPM
GTEx:13.3 nTPM
FANTOM5:25.3 Scaled Tags Per Million
Mouse:1.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028934
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.0
Sample id Sample description nTPM
Hippocampus
nTPM: 14.0
1855 Male, age 76, left hemisphere 15.2
2621 Female, age 67, right hemisphere 14.4
1911 Female, age 85, right hemisphere 14.3
1898 Male, age 80, left hemisphere 14.1
2148 Female, age 91, left hemisphere 13.4
2529 Female, age 94, left hemisphere 12.7
Dentate gyrus
nTPM: 13.2
2010 Male, age 76, both hemispheres 13.5
2528 Male, age 74, both hemispheres 13.5
2530 Female, age 94, left hemisphere 13.4
1927 Female, age 91, both hemispheres 13.3
2531 Female, age 67, both hemispheres 13.1
2246 Female, age 85, both hemispheres 12.7
Entorhinal gyrus
nTPM: 12.6
2117 Female, age 91, right hemisphere 13.6
1787 Male, age 76, left hemisphere 13.2
2686 Male, age 75, right hemisphere 13.0
2613 Female, age 94, left hemisphere 12.4
1938 Female, age 85, left hemisphere 12.1
2764 Male, age 80, right hemisphere 11.5
Hippocampus, CA1
nTPM: 12.9
2045 Male, age 76, both hemispheres 14.2
2082 Female, age 91, right hemisphere 13.6
1873 Female, age 85, both hemispheres 13.2
2527 Male, age 74, both hemispheres 12.1
2749 Male, age 80, left hemisphere 11.4
Hippocampus, CA2
nTPM: 13.5
1940 Female, age 85, left hemisphere 15.0
2113 Female, age 91, right hemisphere 13.9
1963 Male, age 80, left hemisphere 13.1
2437 Female, age 94, left hemisphere 13.1
1892 Male, age 76, both hemispheres 12.8
2249 Male, age 74, both hemispheres 12.8
Hippocampus, CA3
nTPM: 13.1
1867 Male, age 76, both hemispheres 13.6
1891 Female, age 85, both hemispheres 13.4
2861 Female, age 67, both hemispheres 13.4
2436 Male, age 74, both hemispheres 13.3
2620 Female, age 94, left hemisphere 12.4
2137 Male, age 80, left hemisphere 12.2
Parahippocampal cortex
nTPM: 12.8
2250 Female, age 67, right hemisphere 14.2
2018 Male, age 76, both hemispheres 13.8
2693 Female, age 94, both hemispheres 13.4
2532 Female, age 72, left hemisphere 12.8
1990 Female, age 91, right hemisphere 12.5
1850 Male, age 80, both hemispheres 12.4
1933 Female, age 85, both hemispheres 12.4
2245 Female, age 91, both hemispheres 12.3
2622 Female, age 67, right hemisphere 12.3
2692 Male, age 74, both hemispheres 12.2
Perirhinal gyrus
nTPM: 12.4
1841 Female, age 85, right hemisphere 12.9
2521 Female, age 94, right hemisphere 12.8
2848 Male, age 76, right hemisphere 12.5
1847 Female, age 91, left hemisphere 12.1
1794 Male, age 80, right hemisphere 11.9
Subiculum
nTPM: 13.0
2729 Female, age 91, right hemisphere 14.9
2042 Male, age 76, both hemispheres 13.7
2619 Male, age 74, both hemispheres 12.8
1901 Male, age 80, both hemispheres 12.7
1977 Female, age 85, both hemispheres 11.9
2438 Female, age 94, left hemisphere 11.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.3
Samples: 197

Max nTPM: 37.3
Min nTPM: 2.1
Std nTPM: 6.8
Median nTPM: 12.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 37.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 36.9
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 35.9
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 33.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 33.2
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 31.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 31.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 30.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 27.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 27.1
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 26.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.3
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 24.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.5
Min nTPM: 1.2
Sample A Male 1.3
Sample B Male 1.2
Sample C Female 1.5
Sample D Female 1.2
Hippocampal formation
nTPM: 1.8
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.6
Sample A Male 1.6
Sample B Male 1.7
Sample C Female 1.9
Sample D Female 1.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69258292 Antisense, RP_050331_04_C04, Mouse strain C57BL/6J (56 days, male) 0.2
71152210 Antisense, RP_050719_03_E03, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.