HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.5 nTPM
HPA:30.5 nTPM
GTEx:23.4 nTPM
FANTOM5:98.6 Scaled Tags Per Million
Pig:38.3 nTPM
Mouse:26.0 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004432
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.5
Sample id Sample description nTPM
Hippocampus
nTPM: 30.5
1911 Female, age 85, right hemisphere 33.6
1898 Male, age 80, left hemisphere 31.2
2529 Female, age 94, left hemisphere 30.6
1855 Male, age 76, left hemisphere 29.9
2621 Female, age 67, right hemisphere 29.7
2148 Female, age 91, left hemisphere 28.2
Dentate gyrus
nTPM: 26.0
2010 Male, age 76, both hemispheres 30.6
2530 Female, age 94, left hemisphere 28.6
2531 Female, age 67, both hemispheres 25.9
2246 Female, age 85, both hemispheres 23.8
2528 Male, age 74, both hemispheres 23.7
1927 Female, age 91, both hemispheres 23.3
Entorhinal gyrus
nTPM: 24.5
2117 Female, age 91, right hemisphere 32.1
2764 Male, age 80, right hemisphere 25.9
1938 Female, age 85, left hemisphere 23.8
1787 Male, age 76, left hemisphere 23.0
2686 Male, age 75, right hemisphere 23.0
2613 Female, age 94, left hemisphere 19.4
Hippocampus, CA1
nTPM: 28.4
2045 Male, age 76, both hemispheres 31.3
2749 Male, age 80, left hemisphere 30.4
2082 Female, age 91, right hemisphere 27.1
2527 Male, age 74, both hemispheres 27.1
1873 Female, age 85, both hemispheres 26.1
Hippocampus, CA2
nTPM: 26.6
1963 Male, age 80, left hemisphere 34.2
2113 Female, age 91, right hemisphere 28.6
1940 Female, age 85, left hemisphere 26.0
2249 Male, age 74, both hemispheres 24.8
2437 Female, age 94, left hemisphere 24.3
1892 Male, age 76, both hemispheres 21.9
Hippocampus, CA3
nTPM: 26.4
1891 Female, age 85, both hemispheres 34.9
1867 Male, age 76, both hemispheres 29.7
2137 Male, age 80, left hemisphere 26.8
2620 Female, age 94, left hemisphere 22.9
2861 Female, age 67, both hemispheres 22.9
2436 Male, age 74, both hemispheres 21.0
Parahippocampal cortex
nTPM: 22.3
2018 Male, age 76, both hemispheres 29.3
2692 Male, age 74, both hemispheres 25.9
1990 Female, age 91, right hemisphere 24.3
2245 Female, age 91, both hemispheres 23.1
2532 Female, age 72, left hemisphere 22.7
2250 Female, age 67, right hemisphere 21.5
1850 Male, age 80, both hemispheres 20.3
1933 Female, age 85, both hemispheres 19.7
2693 Female, age 94, both hemispheres 19.0
2622 Female, age 67, right hemisphere 17.0
Perirhinal gyrus
nTPM: 19.1
2521 Female, age 94, right hemisphere 21.5
2848 Male, age 76, right hemisphere 20.4
1847 Female, age 91, left hemisphere 19.2
1794 Male, age 80, right hemisphere 18.0
1841 Female, age 85, right hemisphere 16.2
Subiculum
nTPM: 30.3
2042 Male, age 76, both hemispheres 37.1
1901 Male, age 80, both hemispheres 34.6
2729 Female, age 91, right hemisphere 30.3
1977 Female, age 85, both hemispheres 27.1
2619 Male, age 74, both hemispheres 26.7
2438 Female, age 94, left hemisphere 26.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 54.2
Min nTPM: 9.0
Std nTPM: 8.7
Median nTPM: 21.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 54.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 51.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 50.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 47.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 45.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 44.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 43.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 43.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 40.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 39.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.6
FF:10153-102I9 76 years, female 130.3
FF:10169-103B7 60 years, female 66.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.3
Samples: 4

Max nTPM: 45.3
Min nTPM: 29.2
Sample A Female 45.3
Sample B Female 35.3
Sample C Male 43.3
Sample D Male 29.2
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 27.1
Min nTPM: 24.7
Sample A Female 25.8
Sample B Female 26.7
Sample C Male 27.1
Sample D Male 24.7
Subiculum
nTPM: 33.7
Samples: 4

Max nTPM: 35.7
Min nTPM: 32.7
Sample A Female 33.2
Sample B Female 35.7
Sample C Male 33.1
Sample D Male 32.7
Ventral hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 43.2
Min nTPM: 32.0
Sample A Female 43.2
Sample B Female 35.1
Sample C Male 32.0
Sample D Male 34.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 24.2
Min nTPM: 20.4
Sample A Male 24.2
Sample B Male 22.1
Sample C Female 22.2
Sample D Female 20.4
Hippocampal formation
nTPM: 26.0
Samples: 4

Max nTPM: 26.9
Min nTPM: 25.2
Sample A Male 26.3
Sample B Male 26.9
Sample C Female 25.2
Sample D Female 25.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
69549664 Antisense, RP_050317_04_C10, Mouse strain C57BL/6J (56 days, male) 2.3

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