HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.3 nTPM
HPA:18.3 nTPM
GTEx:19.4 nTPM
FANTOM5:11.4 Scaled Tags Per Million
Mouse:46.8 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.0
1898 Male, age 80, left hemisphere 19.9
2529 Female, age 94, left hemisphere 18.3
1911 Female, age 85, right hemisphere 17.7
2621 Female, age 67, right hemisphere 17.6
1855 Male, age 76, left hemisphere 17.4
2148 Female, age 91, left hemisphere 17.1
Dentate gyrus
nTPM: 17.7
2530 Female, age 94, left hemisphere 19.2
2010 Male, age 76, both hemispheres 19.0
1927 Female, age 91, both hemispheres 17.5
2528 Male, age 74, both hemispheres 17.2
2531 Female, age 67, both hemispheres 16.9
2246 Female, age 85, both hemispheres 16.5
Entorhinal gyrus
nTPM: 17.7
2117 Female, age 91, right hemisphere 18.8
2686 Male, age 75, right hemisphere 18.2
1787 Male, age 76, left hemisphere 17.6
2764 Male, age 80, right hemisphere 17.5
2613 Female, age 94, left hemisphere 17.1
1938 Female, age 85, left hemisphere 16.8
Hippocampus, CA1
nTPM: 17.4
2749 Male, age 80, left hemisphere 18.1
2527 Male, age 74, both hemispheres 17.9
1873 Female, age 85, both hemispheres 17.5
2045 Male, age 76, both hemispheres 17.4
2082 Female, age 91, right hemisphere 15.9
Hippocampus, CA2
nTPM: 17.4
1892 Male, age 76, both hemispheres 18.5
1963 Male, age 80, left hemisphere 18.2
2437 Female, age 94, left hemisphere 18.1
2249 Male, age 74, both hemispheres 17.5
2113 Female, age 91, right hemisphere 16.8
1940 Female, age 85, left hemisphere 15.4
Hippocampus, CA3
nTPM: 16.7
1867 Male, age 76, both hemispheres 18.1
2861 Female, age 67, both hemispheres 17.2
1891 Female, age 85, both hemispheres 16.9
2137 Male, age 80, left hemisphere 16.7
2436 Male, age 74, both hemispheres 15.7
2620 Female, age 94, left hemisphere 15.5
Parahippocampal cortex
nTPM: 17.7
1850 Male, age 80, both hemispheres 18.5
1990 Female, age 91, right hemisphere 18.3
2018 Male, age 76, both hemispheres 18.1
2250 Female, age 67, right hemisphere 18.1
2622 Female, age 67, right hemisphere 17.6
2693 Female, age 94, both hemispheres 17.5
2532 Female, age 72, left hemisphere 17.4
2245 Female, age 91, both hemispheres 17.3
1933 Female, age 85, both hemispheres 17.2
2692 Male, age 74, both hemispheres 16.9
Perirhinal gyrus
nTPM: 18.3
2848 Male, age 76, right hemisphere 19.1
1841 Female, age 85, right hemisphere 19.0
1794 Male, age 80, right hemisphere 18.6
2521 Female, age 94, right hemisphere 17.7
1847 Female, age 91, left hemisphere 17.1
Subiculum
nTPM: 17.3
2042 Male, age 76, both hemispheres 17.9
2729 Female, age 91, right hemisphere 17.8
2438 Female, age 94, left hemisphere 17.7
2619 Male, age 74, both hemispheres 17.0
1977 Female, age 85, both hemispheres 16.7
1901 Male, age 80, both hemispheres 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 36.2
Min nTPM: 10.7
Std nTPM: 4.5
Median nTPM: 18.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 36.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 36.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 34.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 32.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 31.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 31.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 30.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 29.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 29.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 27.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.4
FF:10169-103B7 60 years, female 11.5
FF:10153-102I9 76 years, female 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.8
Samples: 4

Max nTPM: 52.4
Min nTPM: 42.0
Sample A Male 47.3
Sample B Male 52.4
Sample C Female 45.4
Sample D Female 42.0
Hippocampal formation
nTPM: 45.1
Samples: 4

Max nTPM: 49.3
Min nTPM: 42.5
Sample A Male 49.3
Sample B Male 45.5
Sample C Female 42.5
Sample D Female 43.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68631838 Antisense, RP_050125_01_B12, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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