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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:55.9 nTPM
FANTOM5:183.8 Scaled Tags Per Million
Pig:39.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041790Antibody CAB004646
Glial cells LowLow
Neuronal cells MediumLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 55.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 55.9
Samples: 246

Max nTPM: 606.4
Min nTPM: 14.9
Std nTPM: 50.2
Median nTPM: 46.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 606.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 269.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 268.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 233.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 221.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 219.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 183.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 181.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 120.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 114.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 98.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 97.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 97.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 94.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 92.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 90.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 89.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 88.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 85.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 85.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 84.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 84.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 84.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 82.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 82.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 81.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 80.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 78.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 78.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 77.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 77.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 77.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 77.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 76.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 75.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 75.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 75.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 74.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 73.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 73.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 73.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 73.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 72.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 71.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 70.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 70.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 70.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 69.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 69.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 68.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 68.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 67.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 67.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 67.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 65.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 65.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 65.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 65.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 65.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 64.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 64.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 64.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 63.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 63.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 63.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 62.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 61.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 61.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 60.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 60.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 60.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 60.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 59.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 59.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 59.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 59.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 58.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 58.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 58.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 57.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 57.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 56.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 56.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 56.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 56.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 55.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 54.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 54.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 53.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 53.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 53.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 53.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 53.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 52.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 52.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 52.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 51.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 51.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 51.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 50.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 50.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 50.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 49.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 49.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 48.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 48.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 48.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 48.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 47.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 47.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 47.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 46.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 46.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 46.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 45.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 45.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 45.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 45.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 45.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 45.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 44.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 44.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 43.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 42.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 42.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 42.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 42.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 41.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 41.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 41.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 40.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 40.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 40.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 40.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 39.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 39.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 39.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 39.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 38.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 38.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 38.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 38.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 38.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 37.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 37.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 37.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 37.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 37.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 36.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 36.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 36.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 36.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 36.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 34.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 34.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 34.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 34.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 34.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 34.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 33.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 33.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 33.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 33.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 33.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 33.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 32.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 32.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 32.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 32.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 32.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 32.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 31.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 31.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 31.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 31.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 31.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 30.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 30.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 30.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 30.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 29.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 29.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 29.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 29.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 29.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 29.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 28.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 28.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 28.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 28.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 28.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 27.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 27.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 27.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 27.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 27.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 26.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 26.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 26.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 26.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 26.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 26.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 26.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 25.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 25.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 25.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 25.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 25.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 25.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 24.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 24.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 24.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 24.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 23.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 23.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 23.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 22.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 22.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 22.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 21.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 21.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 21.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 20.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 20.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 20.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 20.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 20.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 19.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 14.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 183.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 183.8
FF:10164-103B2 76 years, female 183.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 39.7
Pig sample Sample description nTPM
Caudate
nTPM: 39.7
Samples: 4

Max nTPM: 45.7
Min nTPM: 34.7
Sample A Female 37.8
Sample B Female 40.7
Sample C Male 45.7
Sample D Male 34.7

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