COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.1 nTPM
HPA:9.1 nTPM
GTEx:12.1 nTPM
FANTOM5:36.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA040474
Endothelial cells Low
Glandular cells High
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPM 9.1
overview
Male, age 54 		Colon sample 67
nTPM: 5.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 11.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 13.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 11.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 6.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 14
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 5.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 7.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 8.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 8.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 7.1
Samples: 373

Max nTPM: 72.7
Min nTPM: 0.0
Std nTPM: 6.0
Median nTPM: 6.2
GTEX-1R7EU-1826-SM-DTX9L 60-69 years, male 72.7
GTEX-183WM-2526-SM-731BP 70-79 years, female 48.5
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 30.1
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 28.4
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 28.0
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 27.7
GTEX-1JMPZ-2626-SM-ARU8Z 30-39 years, male 27.2
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 26.3
GTEX-1HCVE-2326-SM-9WYUD 50-59 years, male 26.0
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 23.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 20.4
Show allShow less
Colon - Transverse
Average nTPM: 12.1
Samples: 406

Max nTPM: 52.3
Min nTPM: 0.0
Std nTPM: 8.8
Median nTPM: 9.3
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 52.3
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 43.0
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 42.6
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 42.2
GTEX-S4UY-0826-SM-4AD4Z 40-49 years, female 41.3
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 40.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 39.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 38.5
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 38.4
GTEX-1QMI2-2626-SM-E6CR4 60-69 years, male 38.3
GTEX-1JKYN-2326-SM-CGQG7 30-39 years, male 37.3
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 36.7
FF:10014-101C5 62,83,84 years, mixed 36.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.