HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.3 nTPM
HPA:19.3 nTPM
GTEx:21.6 nTPM
FANTOM5:59.0 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:12.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004774
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.3
Sample id Sample description nTPM
Hippocampus
nTPM: 9.7
1911 Female, age 85, right hemisphere 16.6
2621 Female, age 67, right hemisphere 11.3
2529 Female, age 94, left hemisphere 10.1
1898 Male, age 80, left hemisphere 8.7
2148 Female, age 91, left hemisphere 7.6
1855 Male, age 76, left hemisphere 3.9
Dentate gyrus
nTPM: 12.5
2530 Female, age 94, left hemisphere 28.0
2246 Female, age 85, both hemispheres 11.9
2528 Male, age 74, both hemispheres 11.5
2010 Male, age 76, both hemispheres 10.7
2531 Female, age 67, both hemispheres 8.3
1927 Female, age 91, both hemispheres 4.8
Entorhinal gyrus
nTPM: 12.4
2117 Female, age 91, right hemisphere 20.0
2764 Male, age 80, right hemisphere 17.7
2686 Male, age 75, right hemisphere 10.7
2613 Female, age 94, left hemisphere 10.0
1938 Female, age 85, left hemisphere 9.2
1787 Male, age 76, left hemisphere 6.8
Hippocampus, CA1
nTPM: 7.0
2082 Female, age 91, right hemisphere 11.1
1873 Female, age 85, both hemispheres 10.1
2527 Male, age 74, both hemispheres 7.6
2749 Male, age 80, left hemisphere 5.6
2045 Male, age 76, both hemispheres 0.8
Hippocampus, CA2
nTPM: 12.6
1963 Male, age 80, left hemisphere 16.9
2437 Female, age 94, left hemisphere 15.4
2249 Male, age 74, both hemispheres 14.4
1940 Female, age 85, left hemisphere 11.9
2113 Female, age 91, right hemisphere 11.8
1892 Male, age 76, both hemispheres 5.4
Hippocampus, CA3
nTPM: 6.4
1891 Female, age 85, both hemispheres 19.5
1867 Male, age 76, both hemispheres 6.7
2436 Male, age 74, both hemispheres 5.9
2137 Male, age 80, left hemisphere 4.5
2620 Female, age 94, left hemisphere 1.5
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 8.7
2532 Female, age 72, left hemisphere 16.7
2692 Male, age 74, both hemispheres 14.9
1990 Female, age 91, right hemisphere 11.9
2245 Female, age 91, both hemispheres 8.4
1850 Male, age 80, both hemispheres 7.9
1933 Female, age 85, both hemispheres 7.9
2018 Male, age 76, both hemispheres 7.7
2693 Female, age 94, both hemispheres 7.4
2250 Female, age 67, right hemisphere 2.9
2622 Female, age 67, right hemisphere 1.4
Perirhinal gyrus
nTPM: 3.9
2848 Male, age 76, right hemisphere 6.3
2521 Female, age 94, right hemisphere 4.8
1794 Male, age 80, right hemisphere 4.2
1841 Female, age 85, right hemisphere 3.3
1847 Female, age 91, left hemisphere 1.1
Subiculum
nTPM: 19.3
2042 Male, age 76, both hemispheres 32.7
1901 Male, age 80, both hemispheres 27.2
1977 Female, age 85, both hemispheres 18.5
2438 Female, age 94, left hemisphere 14.8
2619 Male, age 74, both hemispheres 13.3
2729 Female, age 91, right hemisphere 9.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.6
Samples: 197

Max nTPM: 79.8
Min nTPM: 2.0
Std nTPM: 14.2
Median nTPM: 18.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 79.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 64.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 62.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 61.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 59.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 55.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 54.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 54.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 49.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 48.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 47.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.0
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 43.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 24.0
Min nTPM: 6.6
Sample A Female 24.0
Sample B Female 10.4
Sample C Male 23.8
Sample D Male 6.6
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.0
Sample A Female 3.4
Sample B Female 5.5
Sample C Male 3.0
Sample D Male 4.0
Subiculum
nTPM: 5.0
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.7
Sample A Female 4.1
Sample B Female 5.9
Sample C Male 3.7
Sample D Male 6.1
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 14.6
Min nTPM: 3.4
Sample A Female 11.6
Sample B Female 3.4
Sample C Male 9.4
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.1
Sample A Male 9.2
Sample B Male 7.9
Sample C Female 9.8
Sample D Female 7.1
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.1
Sample A Male 10.1
Sample B Male 12.1
Sample C Female 14.5
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75084491 Antisense, RP_060412_04_C08, Mouse strain C57BL/6J (56 days, male) 0.7
71234722 Antisense, RP_050505_03_D12, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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