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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1728.8 nTPM
GTEx:1728.8 nTPM
FANTOM5:36.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041874Antibody HPA043317
Squamous epithelial cells HighHigh





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1728.8
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1728.8
Samples: 156

Max nTPM: 10600.3
Min nTPM: 0.0
Std nTPM: 1790.2
Median nTPM: 1408.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 10600.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 7436.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 6552.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 5504.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 5029.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 4923.6
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 4912.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 4777.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 4775.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 4608.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 4588.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 4422.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 4407.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 4402.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 4343.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 4275.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 4000.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 3988.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 3943.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 3926.9
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 3920.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 3802.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 3747.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 3660.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 3594.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 3541.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 3386.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 3167.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 3138.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 3118.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 3053.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 3050.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 3047.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 3034.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2971.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2924.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 2916.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2865.5
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2838.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 2832.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2706.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 2642.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2610.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 2573.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2567.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2516.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 2447.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2432.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2430.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2411.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2393.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2392.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 2337.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2318.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2303.6
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 2284.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2283.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 2269.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 2216.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 2187.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 2149.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2125.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 2030.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2020.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1897.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1789.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1728.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1717.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1690.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1669.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1645.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1599.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1589.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1493.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1481.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1451.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1421.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1417.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1400.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1394.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1363.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1344.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1334.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1279.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1223.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1198.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1187.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1176.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 959.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 793.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 769.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 760.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 754.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 667.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 655.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 632.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 556.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 451.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 451.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 385.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 381.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 377.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 307.6
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 299.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 279.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 225.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 190.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 180.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 177.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 145.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 140.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 140.4
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 136.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 118.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 108.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 98.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 47.5
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 44.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 37.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 34.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 33.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 31.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 29.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 19.1
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 17.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 9.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 8.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 8.3
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 7.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 6.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 4.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 4.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 3.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 3.3
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 2.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 2.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 0.8
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 0.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 0.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 0.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 0.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 0.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 0.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.2
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 0.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 0.1
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 0.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 0.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 36.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 36.2
FF:10204-103F6 68 years, female 36.2

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