HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:72.4 nTPM
HPA:72.4 nTPM
GTEx:49.7 nTPM
FANTOM5:211.7 Scaled Tags Per Million
Pig:42.5 nTPM
Mouse:314.9 nTPM
Allen mouse:19.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007998Antibody HPA019146
Glial cells Not detectedLow
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.4
Sample id Sample description nTPM
Hippocampus
nTPM: 62.1
1898 Male, age 80, left hemisphere 75.9
1911 Female, age 85, right hemisphere 63.7
1855 Male, age 76, left hemisphere 61.6
2621 Female, age 67, right hemisphere 60.3
2148 Female, age 91, left hemisphere 56.3
2529 Female, age 94, left hemisphere 54.7
Dentate gyrus
nTPM: 65.8
1927 Female, age 91, both hemispheres 73.8
2010 Male, age 76, both hemispheres 69.3
2246 Female, age 85, both hemispheres 68.7
2528 Male, age 74, both hemispheres 67.5
2531 Female, age 67, both hemispheres 61.9
2530 Female, age 94, left hemisphere 53.8
Entorhinal gyrus
nTPM: 64.0
2764 Male, age 80, right hemisphere 71.1
1938 Female, age 85, left hemisphere 66.8
1787 Male, age 76, left hemisphere 63.0
2613 Female, age 94, left hemisphere 62.1
2117 Female, age 91, right hemisphere 60.6
2686 Male, age 75, right hemisphere 60.4
Hippocampus, CA1
nTPM: 67.0
2749 Male, age 80, left hemisphere 84.0
2527 Male, age 74, both hemispheres 67.8
1873 Female, age 85, both hemispheres 64.6
2082 Female, age 91, right hemisphere 59.7
2045 Male, age 76, both hemispheres 58.8
Hippocampus, CA2
nTPM: 65.0
1892 Male, age 76, both hemispheres 78.3
2249 Male, age 74, both hemispheres 72.3
1963 Male, age 80, left hemisphere 72.0
2113 Female, age 91, right hemisphere 59.4
2437 Female, age 94, left hemisphere 57.7
1940 Female, age 85, left hemisphere 50.2
Hippocampus, CA3
nTPM: 69.5
2436 Male, age 74, both hemispheres 89.1
2137 Male, age 80, left hemisphere 73.9
1867 Male, age 76, both hemispheres 69.8
2620 Female, age 94, left hemisphere 66.5
1891 Female, age 85, both hemispheres 64.2
2861 Female, age 67, both hemispheres 53.4
Parahippocampal cortex
nTPM: 67.1
1850 Male, age 80, both hemispheres 76.4
1990 Female, age 91, right hemisphere 73.0
2532 Female, age 72, left hemisphere 71.8
2693 Female, age 94, both hemispheres 68.6
2250 Female, age 67, right hemisphere 66.6
1933 Female, age 85, both hemispheres 65.0
2018 Male, age 76, both hemispheres 64.2
2245 Female, age 91, both hemispheres 63.1
2622 Female, age 67, right hemisphere 61.2
2692 Male, age 74, both hemispheres 61.0
Perirhinal gyrus
nTPM: 72.4
1847 Female, age 91, left hemisphere 81.7
1794 Male, age 80, right hemisphere 76.5
1841 Female, age 85, right hemisphere 72.0
2521 Female, age 94, right hemisphere 67.2
2848 Male, age 76, right hemisphere 64.6
Subiculum
nTPM: 65.4
1977 Female, age 85, both hemispheres 70.6
2619 Male, age 74, both hemispheres 69.8
1901 Male, age 80, both hemispheres 68.7
2729 Female, age 91, right hemisphere 66.1
2438 Female, age 94, left hemisphere 61.2
2042 Male, age 76, both hemispheres 55.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.7
Samples: 197

Max nTPM: 92.1
Min nTPM: 20.1
Std nTPM: 13.1
Median nTPM: 47.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 92.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 90.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 85.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 83.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 83.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 81.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 78.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 78.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 77.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 75.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 75.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 211.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 211.7
FF:10169-103B7 60 years, female 246.9
FF:10153-102I9 76 years, female 176.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.0
Samples: 4

Max nTPM: 44.9
Min nTPM: 32.6
Sample A Female 44.9
Sample B Female 41.7
Sample C Male 40.6
Sample D Male 32.6
Entorhinal cortex
nTPM: 42.5
Samples: 4

Max nTPM: 51.1
Min nTPM: 34.8
Sample A Female 42.9
Sample B Female 51.1
Sample C Male 41.0
Sample D Male 34.8
Subiculum
nTPM: 40.7
Samples: 4

Max nTPM: 48.6
Min nTPM: 37.5
Sample A Female 48.6
Sample B Female 38.6
Sample C Male 38.2
Sample D Male 37.5
Ventral hippocampus
nTPM: 40.4
Samples: 4

Max nTPM: 47.8
Min nTPM: 34.6
Sample A Female 47.8
Sample B Female 34.6
Sample C Male 43.7
Sample D Male 35.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 314.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 290.3
Samples: 4

Max nTPM: 311.1
Min nTPM: 269.8
Sample A Male 275.9
Sample B Male 304.4
Sample C Female 311.1
Sample D Female 269.8
Hippocampal formation
nTPM: 314.9
Samples: 4

Max nTPM: 367.5
Min nTPM: 284.2
Sample A Male 367.5
Sample B Male 284.2
Sample C Female 300.5
Sample D Female 307.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.9
655502 Antisense, RP_040922_01_C03, Mouse strain C57BL/6J (56 days, male) 20.4
72723 Antisense, RP_040407_01_A05, Mouse strain C57BL/6J (56 days, male) 19.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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