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MAP1LC3B
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  • MAP1LC3B
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Medium
Purkinje cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:123.7 nTPM
HPA:123.7 nTPM
GTEx:140.9 nTPM
FANTOM5:323.2 Scaled Tags Per Million
Pig:106.8 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA052474Antibody HPA052484Antibody HPA053767Antibody CAB037216
Purkinje cells LowMediumHighMedium
Cells in granular layer LowMediumHighNot detected
Cells in molecular layer Not detectedMediumNot detectedMedium









CEREBELLUM - HPA Brain RNA-seq
Max nTPM 123.7
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 120.6
2101 Male, age 74, right hemisphere 145.0
1768 Female, age 72, unknown 137.0
1774 Male, age 80, left hemisphere 121.2
2006 Male, age 61, right hemisphere 117.9
2055 Female, age 91, right hemisphere 115.2
1788 Male, age 55, unknown 109.8
2003 Female, age 85, right hemisphere 109.7
1769 Male, age 76, right hemisphere 109.5
Cerebellar nuclei
nTPM: 123.7
2783 Female, age 72, unknown 142.3
2177 Female, age 85, both hemispheres 129.8
1879 Male, age 55, unknown 128.1
1871 Male, age 74, unknown 123.2
2318 Male, age 74, left hemisphere 122.0
1966 Female, age 91, left hemisphere 119.9
2175 Male, age 61, right hemisphere 116.9
2882 Male, age 76, left hemisphere 116.2
2005 Male, age 80, left hemisphere 115.2
Flocculonodular lobe
nTPM: 114.1
1771 Male, age 80, left hemisphere 120.5
2176 Female, age 91, right hemisphere 117.3
2004 Male, age 61, right hemisphere 117.0
1792 Male, age 74, unknown 114.1
1765 Male, age 55, unknown 111.2
1835 Female, age 85, right hemisphere 110.6
1767 Male, age 76, left hemisphere 108.1
Vermis
nTPM: 114.3
1751 Male, age 74, right hemisphere 138.8
1928 Female, age 72, unknown 124.4
2834 Male, age 80, left hemisphere 115.6
1778 Female, age 91, left hemisphere 114.6
1770 Male, age 76, left hemisphere 110.0
1825 Male, age 74, unknown 109.3
1988 Female, age 85, left hemisphere 108.8
1766 Male, age 55, unknown 104.3
2460 Male, age 61, both hemispheres 102.6

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 140.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 140.9
Samples: 215

Max nTPM: 216.7
Min nTPM: 100.0
Std nTPM: 20.4
Median nTPM: 140.0
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 216.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 208.8
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 197.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 196.5
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 193.0
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 190.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 189.2
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 180.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 180.8
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 178.8
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 178.7
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 177.7
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 176.1
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 175.7
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 175.4
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 174.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 173.3
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 171.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 171.4
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 170.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 170.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 169.3
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 166.2
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 164.7
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 164.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 163.4
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 163.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 162.4
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 162.2
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 161.8
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 161.2
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 159.8
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 159.1
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 158.3
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 158.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 158.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 157.5
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 157.3
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 157.2
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 157.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 156.7
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 156.3
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 156.0
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 156.0
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 155.8
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 155.2
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 154.7
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 153.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 153.2
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 152.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 151.4
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 151.0
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 150.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 150.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 150.7
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 150.5
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 150.4
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 150.3
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 150.0
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 149.7
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 149.3
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 149.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 148.9
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 148.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 148.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 148.3
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 148.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 148.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 148.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 148.0
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 147.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 146.7
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 146.5
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 146.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 146.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 146.4
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 145.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 145.8
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 145.7
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 145.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 145.5
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 145.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 145.2
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 144.6
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 144.5
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 143.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 143.7
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 143.1
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 143.0
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 143.0
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 142.9
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 142.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 142.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 142.6
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 142.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 142.3
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 142.0
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 141.8
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 141.5
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 141.5
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 141.4
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 141.4
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 140.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 140.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 140.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 140.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 140.2
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 140.0
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 139.9
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 139.9
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 139.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 139.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 138.7
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 138.6
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 138.5
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 138.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 138.0
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 138.0
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 137.9
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 137.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 137.4
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 137.3
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 137.0
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 136.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 136.6
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 136.4
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 135.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 135.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 135.6
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 134.9
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 134.7
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 134.6
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 134.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 134.5
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 132.4
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 132.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 131.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 131.3
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 131.1
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 131.1
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 131.1
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 130.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 130.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 129.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 129.6
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 129.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 129.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 129.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 129.2
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 129.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 129.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 128.9
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 128.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 128.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 127.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 127.2
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 127.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 126.8
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 126.7
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 126.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 126.5
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 126.3
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 125.9
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 125.5
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 125.2
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 125.1
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 125.0
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 124.9
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 124.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 124.7
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 124.5
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 122.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 122.8
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 122.7
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 122.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 122.0
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 121.9
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 121.8
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 121.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 121.3
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 121.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 120.9
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 120.7
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 120.6
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 120.6
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 120.4
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 119.9
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 119.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 119.3
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 118.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 118.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 118.4
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 117.9
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 117.5
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 116.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 116.3
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 116.1
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 116.0
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 115.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 115.5
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 115.4
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 113.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 112.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 112.3
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 111.5
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 110.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 108.3
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 107.9
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 107.8
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 107.4
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 103.9
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 103.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 101.5
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 100.7
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 100.0
Show allShow less
Brain - Cerebellum
Average nTPM: 110.6
Samples: 241

Max nTPM: 183.6
Min nTPM: 63.8
Std nTPM: 18.3
Median nTPM: 107.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 183.6
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 164.1
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 161.3
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 160.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 156.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 155.6
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 152.3
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 149.8
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 148.8
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 148.4
GTEX-1192X-3226-SM-5987D 50-59 years, male 146.2
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 146.2
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 145.5
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 145.3
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 145.3
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 143.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 143.4
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 142.5
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 141.3
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 141.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 140.5
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 138.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 138.3
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 137.9
GTEX-WL46-2826-SM-3LK81 50-59 years, male 137.2
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 135.6
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 134.4
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 133.6
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 132.5
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 131.1
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 130.5
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 130.3
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 129.4
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 128.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 128.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 128.5
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 128.2
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 128.1
GTEX-RU72-2926-SM-2TF66 50-59 years, female 127.9
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 126.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 126.2
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 125.7
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 125.5
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 125.2
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 124.8
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 124.6
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 124.6
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 124.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 124.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 123.8
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 123.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 123.6
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 122.6
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 122.6
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 122.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 122.4
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 122.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 121.9
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 121.7
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 121.6
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 121.1
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 121.0
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 120.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 120.6
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 120.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 120.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 119.8
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 119.7
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 119.6
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 119.2
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 118.4
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 118.3
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 117.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 117.4
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 117.3
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 117.1
GTEX-17EVP-2926-SM-793BU 40-49 years, male 117.0
GTEX-15G19-2826-SM-6M48K 60-69 years, male 116.8
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 116.6
GTEX-X261-3126-SM-4PQZC 50-59 years, male 116.6
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 116.5
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 116.4
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 116.2
GTEX-1B933-3026-SM-731DB 50-59 years, female 115.9
GTEX-11NUK-3026-SM-5986K 50-59 years, male 115.6
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 115.1
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 114.9
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 114.7
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 114.5
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 114.1
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 114.1
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 113.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 113.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 113.2
GTEX-18465-2926-SM-7KFSE 50-59 years, male 112.1
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 112.0
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 111.6
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 111.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 111.5
GTEX-14E6D-2926-SM-664OP 50-59 years, male 111.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 110.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 110.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 110.5
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 110.4
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 110.2
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 109.6
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 109.5
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 109.2
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 108.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 108.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 108.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 108.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 108.2
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 108.2
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 108.1
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 108.0
GTEX-11EI6-2926-SM-5985U 60-69 years, male 107.9
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 107.7
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 107.6
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 107.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 107.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 107.1
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 107.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 107.1
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 106.7
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 106.5
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 106.4
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 106.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 105.9
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 105.7
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 105.3
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 105.3
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 105.2
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 105.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 104.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 104.8
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 104.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 104.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 104.3
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 104.1
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 104.0
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 103.6
GTEX-14ABY-3026-SM-664NE 50-59 years, male 103.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 103.4
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 103.3
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 103.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 103.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 103.1
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 103.0
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 103.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 102.6
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 102.6
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 102.6
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 102.3
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 102.2
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 102.0
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 101.9
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 101.7
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 101.5
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 101.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 101.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 100.9
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 100.9
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 100.9
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 100.7
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 100.5
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 100.3
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 100.1
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 100.1
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 100.0
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 99.5
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 99.2
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 98.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 98.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 98.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 98.3
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 98.1
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 97.7
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 97.6
GTEX-17HII-2926-SM-79OMK 50-59 years, male 97.5
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 97.4
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 97.2
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 97.2
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 97.1
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 96.7
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 96.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 96.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 96.3
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 96.2
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 96.1
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 96.0
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 95.8
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 95.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 95.5
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 95.3
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 95.2
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 94.9
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 94.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 94.3
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 94.2
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 93.9
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 93.4
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 93.3
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 93.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 93.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 92.8
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 92.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 92.3
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 92.0
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 91.6
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 91.6
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 90.9
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 90.9
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 90.4
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 90.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 90.0
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 89.9
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 89.6
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 89.5
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 89.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 89.2
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 89.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 88.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 88.6
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 88.5
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 87.6
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 87.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 87.0
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 86.5
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 86.3
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 85.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 84.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 84.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 84.2
GTEX-11DYG-2926-SM-5H132 60-69 years, male 84.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 82.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 81.4
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 80.3
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 79.6
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 79.5
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 63.8
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 323.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 323.2
FF:10166-103B4 76 years, female 346.9
FF:10083-102B2 22-68 years, mixed 299.5

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 106.8
Pig sample Sample description nTPM
Cerebellum
nTPM: 106.8
Samples: 4

Max nTPM: 165.2
Min nTPM: 80.5
Sample A Female 165.2
Sample B Female 99.5
Sample C Male 82.0
Sample D Male 80.5

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