HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.2 nTPM
HPA:19.2 nTPM
GTEx:15.0 nTPM
FANTOM5:40.5 Scaled Tags Per Million
Pig:36.7 nTPM
Mouse:41.1 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035199Antibody CAB004272
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.2
Sample id Sample description nTPM
Hippocampus
nTPM: 16.2
2621 Female, age 67, right hemisphere 21.8
2148 Female, age 91, left hemisphere 21.1
1898 Male, age 80, left hemisphere 16.4
1855 Male, age 76, left hemisphere 14.4
1911 Female, age 85, right hemisphere 12.8
2529 Female, age 94, left hemisphere 10.7
Dentate gyrus
nTPM: 16.1
2531 Female, age 67, both hemispheres 24.0
1927 Female, age 91, both hemispheres 20.1
2530 Female, age 94, left hemisphere 16.8
2246 Female, age 85, both hemispheres 14.0
2528 Male, age 74, both hemispheres 12.2
2010 Male, age 76, both hemispheres 9.4
Entorhinal gyrus
nTPM: 14.1
2764 Male, age 80, right hemisphere 18.4
2613 Female, age 94, left hemisphere 17.9
2686 Male, age 75, right hemisphere 13.9
1787 Male, age 76, left hemisphere 13.6
1938 Female, age 85, left hemisphere 13.6
2117 Female, age 91, right hemisphere 7.6
Hippocampus, CA1
nTPM: 17.6
2749 Male, age 80, left hemisphere 28.8
2082 Female, age 91, right hemisphere 15.6
1873 Female, age 85, both hemispheres 15.5
2045 Male, age 76, both hemispheres 14.8
2527 Male, age 74, both hemispheres 13.0
Hippocampus, CA2
nTPM: 14.6
1963 Male, age 80, left hemisphere 20.5
2113 Female, age 91, right hemisphere 15.8
2437 Female, age 94, left hemisphere 15.3
1892 Male, age 76, both hemispheres 15.2
1940 Female, age 85, left hemisphere 12.4
2249 Male, age 74, both hemispheres 8.6
Hippocampus, CA3
nTPM: 19.2
2861 Female, age 67, both hemispheres 34.8
2620 Female, age 94, left hemisphere 25.9
2137 Male, age 80, left hemisphere 25.6
2436 Male, age 74, both hemispheres 9.8
1867 Male, age 76, both hemispheres 9.6
1891 Female, age 85, both hemispheres 9.6
Parahippocampal cortex
nTPM: 13.7
2245 Female, age 91, both hemispheres 21.0
2622 Female, age 67, right hemisphere 19.7
1850 Male, age 80, both hemispheres 15.6
1933 Female, age 85, both hemispheres 13.4
2693 Female, age 94, both hemispheres 12.2
2532 Female, age 72, left hemisphere 12.0
1990 Female, age 91, right hemisphere 11.2
2018 Male, age 76, both hemispheres 11.0
2692 Male, age 74, both hemispheres 10.7
2250 Female, age 67, right hemisphere 10.0
Perirhinal gyrus
nTPM: 16.7
1794 Male, age 80, right hemisphere 21.1
1847 Female, age 91, left hemisphere 17.3
2521 Female, age 94, right hemisphere 16.8
1841 Female, age 85, right hemisphere 14.1
2848 Male, age 76, right hemisphere 13.9
Subiculum
nTPM: 8.9
2729 Female, age 91, right hemisphere 11.8
1977 Female, age 85, both hemispheres 11.6
1901 Male, age 80, both hemispheres 11.0
2619 Male, age 74, both hemispheres 9.0
2042 Male, age 76, both hemispheres 6.7
2438 Female, age 94, left hemisphere 3.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 33.3
Min nTPM: 6.8
Std nTPM: 5.4
Median nTPM: 13.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 33.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 32.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 29.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 28.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 27.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 26.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 26.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 26.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.5
FF:10169-103B7 60 years, female 48.1
FF:10153-102I9 76 years, female 33.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.7
Samples: 4

Max nTPM: 43.9
Min nTPM: 29.2
Sample A Female 43.9
Sample B Female 41.0
Sample C Male 29.2
Sample D Male 32.5
Entorhinal cortex
nTPM: 31.9
Samples: 4

Max nTPM: 34.9
Min nTPM: 27.2
Sample A Female 34.9
Sample B Female 30.7
Sample C Male 34.7
Sample D Male 27.2
Subiculum
nTPM: 31.5
Samples: 4

Max nTPM: 39.6
Min nTPM: 27.2
Sample A Female 39.6
Sample B Female 29.4
Sample C Male 29.6
Sample D Male 27.2
Ventral hippocampus
nTPM: 34.1
Samples: 4

Max nTPM: 40.4
Min nTPM: 27.4
Sample A Female 29.1
Sample B Female 27.4
Sample C Male 39.4
Sample D Male 40.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.5
Samples: 4

Max nTPM: 43.4
Min nTPM: 38.2
Sample A Male 40.4
Sample B Male 40.0
Sample C Female 38.2
Sample D Female 43.4
Hippocampal formation
nTPM: 41.1
Samples: 4

Max nTPM: 46.3
Min nTPM: 34.5
Sample A Male 39.6
Sample B Male 44.0
Sample C Female 46.3
Sample D Female 34.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
69782957 Antisense, RP_050505_04_B01, Mouse strain C57BL/6J (56 days, male) 5.3

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