HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.9 nTPM
HPA:32.9 nTPM
GTEx:25.0 nTPM
FANTOM5:68.5 Scaled Tags Per Million
Pig:56.8 nTPM
Mouse:64.1 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021453Antibody HPA045649
Glial cells Not detectedLow
Neuronal cells LowLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.9
1898 Male, age 80, left hemisphere 36.2
2621 Female, age 67, right hemisphere 32.4
1855 Male, age 76, left hemisphere 32.3
2148 Female, age 91, left hemisphere 27.5
2529 Female, age 94, left hemisphere 26.7
1911 Female, age 85, right hemisphere 24.4
Dentate gyrus
nTPM: 29.6
1927 Female, age 91, both hemispheres 31.4
2010 Male, age 76, both hemispheres 31.4
2531 Female, age 67, both hemispheres 29.9
2530 Female, age 94, left hemisphere 28.4
2246 Female, age 85, both hemispheres 28.2
2528 Male, age 74, both hemispheres 28.2
Entorhinal gyrus
nTPM: 30.1
2686 Male, age 75, right hemisphere 34.2
2764 Male, age 80, right hemisphere 31.4
2613 Female, age 94, left hemisphere 30.0
1938 Female, age 85, left hemisphere 29.1
2117 Female, age 91, right hemisphere 28.1
1787 Male, age 76, left hemisphere 27.8
Hippocampus, CA1
nTPM: 32.9
2749 Male, age 80, left hemisphere 46.3
1873 Female, age 85, both hemispheres 32.1
2045 Male, age 76, both hemispheres 31.2
2527 Male, age 74, both hemispheres 30.2
2082 Female, age 91, right hemisphere 24.9
Hippocampus, CA2
nTPM: 28.3
1892 Male, age 76, both hemispheres 35.8
1963 Male, age 80, left hemisphere 33.2
1940 Female, age 85, left hemisphere 25.3
2113 Female, age 91, right hemisphere 25.3
2249 Male, age 74, both hemispheres 25.2
2437 Female, age 94, left hemisphere 24.8
Hippocampus, CA3
nTPM: 31.7
2137 Male, age 80, left hemisphere 36.4
2861 Female, age 67, both hemispheres 34.9
2620 Female, age 94, left hemisphere 32.9
1867 Male, age 76, both hemispheres 31.5
2436 Male, age 74, both hemispheres 27.6
1891 Female, age 85, both hemispheres 26.9
Parahippocampal cortex
nTPM: 30.2
2622 Female, age 67, right hemisphere 37.2
1850 Male, age 80, both hemispheres 36.2
2692 Male, age 74, both hemispheres 30.2
2693 Female, age 94, both hemispheres 30.1
2245 Female, age 91, both hemispheres 29.8
1933 Female, age 85, both hemispheres 29.3
2532 Female, age 72, left hemisphere 29.1
1990 Female, age 91, right hemisphere 27.6
2250 Female, age 67, right hemisphere 27.1
2018 Male, age 76, both hemispheres 25.1
Perirhinal gyrus
nTPM: 32.9
1794 Male, age 80, right hemisphere 36.1
1847 Female, age 91, left hemisphere 35.1
1841 Female, age 85, right hemisphere 31.8
2521 Female, age 94, right hemisphere 30.8
2848 Male, age 76, right hemisphere 30.6
Subiculum
nTPM: 27.0
2619 Male, age 74, both hemispheres 30.1
1977 Female, age 85, both hemispheres 28.9
1901 Male, age 80, both hemispheres 28.1
2729 Female, age 91, right hemisphere 25.9
2042 Male, age 76, both hemispheres 24.8
2438 Female, age 94, left hemisphere 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.0
Samples: 197

Max nTPM: 41.7
Min nTPM: 14.0
Std nTPM: 5.3
Median nTPM: 24.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 41.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 38.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 38.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 37.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 37.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 36.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 35.8
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 35.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 35.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.5
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 57.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.8
Samples: 4

Max nTPM: 66.7
Min nTPM: 48.2
Sample A Female 66.7
Sample B Female 56.4
Sample C Male 55.9
Sample D Male 48.2
Entorhinal cortex
nTPM: 51.5
Samples: 4

Max nTPM: 55.9
Min nTPM: 45.5
Sample A Female 52.0
Sample B Female 55.9
Sample C Male 52.7
Sample D Male 45.5
Subiculum
nTPM: 53.2
Samples: 4

Max nTPM: 62.8
Min nTPM: 48.7
Sample A Female 62.8
Sample B Female 50.7
Sample C Male 50.5
Sample D Male 48.7
Ventral hippocampus
nTPM: 54.3
Samples: 4

Max nTPM: 61.1
Min nTPM: 43.9
Sample A Female 57.3
Sample B Female 43.9
Sample C Male 61.1
Sample D Male 54.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.4
Samples: 4

Max nTPM: 70.4
Min nTPM: 58.3
Sample A Male 58.3
Sample B Male 61.8
Sample C Female 63.0
Sample D Female 70.4
Hippocampal formation
nTPM: 64.1
Samples: 4

Max nTPM: 70.3
Min nTPM: 59.5
Sample A Male 59.6
Sample B Male 67.0
Sample C Female 70.3
Sample D Female 59.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
68269688 Antisense, RP_041129_02_A09, Mouse strain C57BL/6J (56 days, male) 6.5
844 Antisense, RP_Baylor_102982, Mouse strain C57BL/6J (56 days, male) 0.0

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