HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.1 nTPM
HPA:13.1 nTPM
GTEx:14.3 nTPM
FANTOM5:93.2 Scaled Tags Per Million
Pig:3.7 nTPM
Mouse:8.9 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057099Antibody CAB017189
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
1911 Female, age 85, right hemisphere 13.4
1855 Male, age 76, left hemisphere 13.2
2621 Female, age 67, right hemisphere 13.1
2148 Female, age 91, left hemisphere 9.3
1898 Male, age 80, left hemisphere 7.1
2529 Female, age 94, left hemisphere 7.1
Dentate gyrus
nTPM: 10.6
2246 Female, age 85, both hemispheres 12.6
1927 Female, age 91, both hemispheres 11.8
2010 Male, age 76, both hemispheres 11.2
2531 Female, age 67, both hemispheres 10.7
2530 Female, age 94, left hemisphere 10.5
2528 Male, age 74, both hemispheres 6.7
Entorhinal gyrus
nTPM: 10.9
2613 Female, age 94, left hemisphere 14.2
1787 Male, age 76, left hemisphere 10.8
2117 Female, age 91, right hemisphere 10.7
1938 Female, age 85, left hemisphere 10.3
2686 Male, age 75, right hemisphere 10.0
2764 Male, age 80, right hemisphere 9.3
Hippocampus, CA1
nTPM: 10.0
2082 Female, age 91, right hemisphere 12.7
1873 Female, age 85, both hemispheres 11.0
2045 Male, age 76, both hemispheres 10.9
2749 Male, age 80, left hemisphere 8.7
2527 Male, age 74, both hemispheres 6.8
Hippocampus, CA2
nTPM: 9.4
2113 Female, age 91, right hemisphere 13.7
1940 Female, age 85, left hemisphere 12.9
1963 Male, age 80, left hemisphere 9.1
1892 Male, age 76, both hemispheres 8.3
2437 Female, age 94, left hemisphere 7.5
2249 Male, age 74, both hemispheres 4.9
Hippocampus, CA3
nTPM: 9.6
1891 Female, age 85, both hemispheres 12.4
2861 Female, age 67, both hemispheres 10.9
2137 Male, age 80, left hemisphere 10.5
2620 Female, age 94, left hemisphere 10.0
1867 Male, age 76, both hemispheres 9.2
2436 Male, age 74, both hemispheres 4.2
Parahippocampal cortex
nTPM: 10.7
2693 Female, age 94, both hemispheres 13.6
2532 Female, age 72, left hemisphere 12.9
2692 Male, age 74, both hemispheres 11.1
2245 Female, age 91, both hemispheres 11.0
2018 Male, age 76, both hemispheres 10.8
1933 Female, age 85, both hemispheres 10.6
2622 Female, age 67, right hemisphere 9.4
1990 Female, age 91, right hemisphere 9.3
2250 Female, age 67, right hemisphere 9.2
1850 Male, age 80, both hemispheres 9.1
Perirhinal gyrus
nTPM: 8.7
2848 Male, age 76, right hemisphere 11.0
2521 Female, age 94, right hemisphere 9.2
1841 Female, age 85, right hemisphere 8.7
1847 Female, age 91, left hemisphere 8.2
1794 Male, age 80, right hemisphere 6.5
Subiculum
nTPM: 13.1
2042 Male, age 76, both hemispheres 16.7
2438 Female, age 94, left hemisphere 16.6
2729 Female, age 91, right hemisphere 13.0
1901 Male, age 80, both hemispheres 11.5
1977 Female, age 85, both hemispheres 10.9
2619 Male, age 74, both hemispheres 9.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.3
Samples: 197

Max nTPM: 32.6
Min nTPM: 7.9
Std nTPM: 4.1
Median nTPM: 13.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 32.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 26.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 24.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 24.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 23.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 23.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 21.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 21.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.2
FF:10153-102I9 76 years, female 94.3
FF:10169-103B7 60 years, female 92.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.9
Sample A Female 2.9
Sample B Female 3.8
Sample C Male 3.9
Sample D Male 4.0
Entorhinal cortex
nTPM: 3.3
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.9
Sample A Female 2.9
Sample B Female 3.4
Sample C Male 3.2
Sample D Male 3.5
Subiculum
nTPM: 3.4
Samples: 4

Max nTPM: 3.8
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 3.8
Sample C Male 3.5
Sample D Male 3.6
Ventral hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.8
Sample A Female 3.1
Sample B Female 4.1
Sample C Male 2.8
Sample D Male 3.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.4
Sample A Male 8.1
Sample B Male 7.4
Sample C Female 8.1
Sample D Female 10.9
Hippocampal formation
nTPM: 8.9
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.8
Sample A Male 6.8
Sample B Male 10.5
Sample C Female 11.0
Sample D Female 7.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
70302270 Antisense, RP_050607_04_A08, Mouse strain C57BL/6J (56 days, male) 6.4
74300807 Antisense, RP_051219_03_G11, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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