HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.3 nTPM
HPA:22.3 nTPM
GTEx:22.4 nTPM
FANTOM5:29.8 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:70.0 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021878
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.3
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
1855 Male, age 76, left hemisphere 20.6
1898 Male, age 80, left hemisphere 20.5
1911 Female, age 85, right hemisphere 19.0
2529 Female, age 94, left hemisphere 18.4
2621 Female, age 67, right hemisphere 18.4
2148 Female, age 91, left hemisphere 18.1
Dentate gyrus
nTPM: 19.3
2010 Male, age 76, both hemispheres 23.9
1927 Female, age 91, both hemispheres 20.1
2528 Male, age 74, both hemispheres 19.2
2246 Female, age 85, both hemispheres 18.0
2531 Female, age 67, both hemispheres 17.5
2530 Female, age 94, left hemisphere 17.3
Entorhinal gyrus
nTPM: 18.2
1938 Female, age 85, left hemisphere 19.7
2117 Female, age 91, right hemisphere 19.2
1787 Male, age 76, left hemisphere 18.7
2764 Male, age 80, right hemisphere 18.6
2613 Female, age 94, left hemisphere 17.0
2686 Male, age 75, right hemisphere 16.0
Hippocampus, CA1
nTPM: 22.3
2045 Male, age 76, both hemispheres 27.7
2749 Male, age 80, left hemisphere 26.9
1873 Female, age 85, both hemispheres 20.2
2527 Male, age 74, both hemispheres 19.0
2082 Female, age 91, right hemisphere 17.9
Hippocampus, CA2
nTPM: 20.8
1892 Male, age 76, both hemispheres 28.3
2249 Male, age 74, both hemispheres 21.5
1963 Male, age 80, left hemisphere 20.4
2113 Female, age 91, right hemisphere 19.1
1940 Female, age 85, left hemisphere 18.1
2437 Female, age 94, left hemisphere 17.2
Hippocampus, CA3
nTPM: 21.9
1867 Male, age 76, both hemispheres 32.9
2137 Male, age 80, left hemisphere 25.1
1891 Female, age 85, both hemispheres 20.1
2436 Male, age 74, both hemispheres 19.0
2620 Female, age 94, left hemisphere 18.5
2861 Female, age 67, both hemispheres 16.1
Parahippocampal cortex
nTPM: 18.0
1850 Male, age 80, both hemispheres 20.0
2018 Male, age 76, both hemispheres 19.0
1990 Female, age 91, right hemisphere 18.9
2250 Female, age 67, right hemisphere 18.9
1933 Female, age 85, both hemispheres 18.7
2245 Female, age 91, both hemispheres 17.7
2532 Female, age 72, left hemisphere 17.6
2693 Female, age 94, both hemispheres 16.9
2692 Male, age 74, both hemispheres 16.5
2622 Female, age 67, right hemisphere 16.2
Perirhinal gyrus
nTPM: 19.4
1841 Female, age 85, right hemisphere 20.1
1794 Male, age 80, right hemisphere 19.8
1847 Female, age 91, left hemisphere 19.8
2848 Male, age 76, right hemisphere 19.1
2521 Female, age 94, right hemisphere 18.2
Subiculum
nTPM: 19.8
2042 Male, age 76, both hemispheres 25.6
1901 Male, age 80, both hemispheres 21.6
1977 Female, age 85, both hemispheres 19.3
2729 Female, age 91, right hemisphere 18.8
2619 Male, age 74, both hemispheres 17.9
2438 Female, age 94, left hemisphere 15.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 196.3
Min nTPM: 9.5
Std nTPM: 13.5
Median nTPM: 20.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 196.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 45.2
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 43.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 43.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 38.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 36.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 35.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 34.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 33.2
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 32.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 32.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.8
FF:10153-102I9 76 years, female 35.5
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 39.5
Min nTPM: 24.4
Sample A Female 39.5
Sample B Female 29.4
Sample C Male 27.9
Sample D Male 24.4
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 27.2
Min nTPM: 18.3
Sample A Female 27.2
Sample B Female 25.4
Sample C Male 21.9
Sample D Male 18.3
Subiculum
nTPM: 24.5
Samples: 4

Max nTPM: 30.3
Min nTPM: 21.2
Sample A Female 30.3
Sample B Female 24.0
Sample C Male 22.3
Sample D Male 21.2
Ventral hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 30.1
Min nTPM: 20.9
Sample A Female 27.9
Sample B Female 20.9
Sample C Male 30.1
Sample D Male 28.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.2
Samples: 4

Max nTPM: 62.5
Min nTPM: 53.7
Sample A Male 53.7
Sample B Male 62.5
Sample C Female 62.1
Sample D Female 54.4
Hippocampal formation
nTPM: 70.0
Samples: 4

Max nTPM: 72.2
Min nTPM: 66.9
Sample A Male 72.2
Sample B Male 66.9
Sample C Female 70.8
Sample D Female 70.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
2143 Antisense, RP_040407_02_D03, Mouse strain C57BL/6J (56 days, male) 9.3
2144 Antisense, RP_040407_02_D03, Mouse strain C57BL/6J (56 days, male) 1.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.