HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:56.9 nTPM
HPA:56.9 nTPM
GTEx:62.1 nTPM
FANTOM5:74.6 Scaled Tags Per Million
Pig:76.6 nTPM
Mouse:152.3 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021854Antibody HPA021991Antibody HPA023922
Glial cells LowNot detectedNot detected
Neuronal cells LowMediumLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.9
Sample id Sample description nTPM
Hippocampus
nTPM: 54.9
2148 Female, age 91, left hemisphere 71.5
2621 Female, age 67, right hemisphere 69.2
1898 Male, age 80, left hemisphere 59.1
1855 Male, age 76, left hemisphere 54.4
2529 Female, age 94, left hemisphere 38.1
1911 Female, age 85, right hemisphere 37.2
Dentate gyrus
nTPM: 56.9
1927 Female, age 91, both hemispheres 73.3
2530 Female, age 94, left hemisphere 65.9
2531 Female, age 67, both hemispheres 56.0
2010 Male, age 76, both hemispheres 52.4
2528 Male, age 74, both hemispheres 49.1
2246 Female, age 85, both hemispheres 44.7
Entorhinal gyrus
nTPM: 32.8
2613 Female, age 94, left hemisphere 42.0
2686 Male, age 75, right hemisphere 37.2
2764 Male, age 80, right hemisphere 35.0
1787 Male, age 76, left hemisphere 29.7
1938 Female, age 85, left hemisphere 27.1
2117 Female, age 91, right hemisphere 25.9
Hippocampus, CA1
nTPM: 53.5
2749 Male, age 80, left hemisphere 81.4
1873 Female, age 85, both hemispheres 65.2
2527 Male, age 74, both hemispheres 52.5
2045 Male, age 76, both hemispheres 40.3
2082 Female, age 91, right hemisphere 28.1
Hippocampus, CA2
nTPM: 50.2
1963 Male, age 80, left hemisphere 98.3
1892 Male, age 76, both hemispheres 57.1
2437 Female, age 94, left hemisphere 48.8
2249 Male, age 74, both hemispheres 37.0
2113 Female, age 91, right hemisphere 32.9
1940 Female, age 85, left hemisphere 27.1
Hippocampus, CA3
nTPM: 50.3
2861 Female, age 67, both hemispheres 73.7
2620 Female, age 94, left hemisphere 65.2
2137 Male, age 80, left hemisphere 53.9
1891 Female, age 85, both hemispheres 37.7
2436 Male, age 74, both hemispheres 36.4
1867 Male, age 76, both hemispheres 34.7
Parahippocampal cortex
nTPM: 37.1
2622 Female, age 67, right hemisphere 43.2
2245 Female, age 91, both hemispheres 42.9
2250 Female, age 67, right hemisphere 41.2
2693 Female, age 94, both hemispheres 39.9
2692 Male, age 74, both hemispheres 38.5
2532 Female, age 72, left hemisphere 36.5
1990 Female, age 91, right hemisphere 35.4
1850 Male, age 80, both hemispheres 33.9
1933 Female, age 85, both hemispheres 30.9
2018 Male, age 76, both hemispheres 28.3
Perirhinal gyrus
nTPM: 35.2
2521 Female, age 94, right hemisphere 38.9
1847 Female, age 91, left hemisphere 38.1
1794 Male, age 80, right hemisphere 35.6
1841 Female, age 85, right hemisphere 35.6
2848 Male, age 76, right hemisphere 27.8
Subiculum
nTPM: 34.9
2438 Female, age 94, left hemisphere 39.8
2729 Female, age 91, right hemisphere 39.6
2619 Male, age 74, both hemispheres 37.2
1901 Male, age 80, both hemispheres 34.7
2042 Male, age 76, both hemispheres 29.2
1977 Female, age 85, both hemispheres 29.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.1
Samples: 197

Max nTPM: 148.8
Min nTPM: 15.7
Std nTPM: 26.9
Median nTPM: 58.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 148.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 145.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 130.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 124.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 122.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 117.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 116.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 114.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 113.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 112.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 108.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.6
FF:10169-103B7 60 years, female 97.3
FF:10153-102I9 76 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.7
Samples: 4

Max nTPM: 48.7
Min nTPM: 29.9
Sample A Female 48.7
Sample B Female 48.6
Sample C Male 47.4
Sample D Male 29.9
Entorhinal cortex
nTPM: 76.6
Samples: 4

Max nTPM: 84.5
Min nTPM: 68.0
Sample A Female 71.9
Sample B Female 84.5
Sample C Male 82.1
Sample D Male 68.0
Subiculum
nTPM: 48.1
Samples: 4

Max nTPM: 62.6
Min nTPM: 41.1
Sample A Female 62.6
Sample B Female 43.9
Sample C Male 44.9
Sample D Male 41.1
Ventral hippocampus
nTPM: 47.7
Samples: 4

Max nTPM: 65.6
Min nTPM: 35.0
Sample A Female 50.0
Sample B Female 35.0
Sample C Male 65.6
Sample D Male 40.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 152.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 152.3
Samples: 4

Max nTPM: 173.4
Min nTPM: 142.0
Sample A Male 148.3
Sample B Male 142.0
Sample C Female 145.5
Sample D Female 173.4
Hippocampal formation
nTPM: 142.0
Samples: 4

Max nTPM: 155.9
Min nTPM: 131.9
Sample A Male 137.3
Sample B Male 142.8
Sample C Female 155.9
Sample D Female 131.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
74562224 Antisense, RP_060208_02_E01, Mouse strain C57BL/6J (56 days, male) 10.4

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