HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.3 nTPM
HPA:20.3 nTPM
GTEx:12.2 nTPM
FANTOM5:15.5 Scaled Tags Per Million
Pig:5.1 nTPM
Mouse:6.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051171Antibody HPA057021
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 20.3
2529 Female, age 94, left hemisphere 21.5
1898 Male, age 80, left hemisphere 21.1
2148 Female, age 91, left hemisphere 20.7
1855 Male, age 76, left hemisphere 19.8
1911 Female, age 85, right hemisphere 19.8
2621 Female, age 67, right hemisphere 18.8
Dentate gyrus
nTPM: 19.3
2528 Male, age 74, both hemispheres 20.7
2246 Female, age 85, both hemispheres 20.3
2530 Female, age 94, left hemisphere 19.5
1927 Female, age 91, both hemispheres 18.8
2010 Male, age 76, both hemispheres 18.3
2531 Female, age 67, both hemispheres 18.1
Entorhinal gyrus
nTPM: 19.5
2117 Female, age 91, right hemisphere 22.4
2686 Male, age 75, right hemisphere 20.5
1787 Male, age 76, left hemisphere 19.7
1938 Female, age 85, left hemisphere 19.1
2764 Male, age 80, right hemisphere 18.1
2613 Female, age 94, left hemisphere 17.6
Hippocampus, CA1
nTPM: 19.4
2527 Male, age 74, both hemispheres 21.5
2082 Female, age 91, right hemisphere 20.3
1873 Female, age 85, both hemispheres 19.3
2045 Male, age 76, both hemispheres 17.9
2749 Male, age 80, left hemisphere 17.7
Hippocampus, CA2
nTPM: 20.1
2249 Male, age 74, both hemispheres 21.7
1940 Female, age 85, left hemisphere 21.4
2113 Female, age 91, right hemisphere 21.0
2437 Female, age 94, left hemisphere 20.3
1963 Male, age 80, left hemisphere 19.1
1892 Male, age 76, both hemispheres 16.9
Hippocampus, CA3
nTPM: 19.1
2620 Female, age 94, left hemisphere 21.3
1891 Female, age 85, both hemispheres 20.0
2436 Male, age 74, both hemispheres 19.8
2861 Female, age 67, both hemispheres 18.5
1867 Male, age 76, both hemispheres 17.6
2137 Male, age 80, left hemisphere 17.6
Parahippocampal cortex
nTPM: 19.5
2692 Male, age 74, both hemispheres 22.0
2250 Female, age 67, right hemisphere 21.1
2622 Female, age 67, right hemisphere 20.9
1933 Female, age 85, both hemispheres 20.1
2018 Male, age 76, both hemispheres 19.7
2245 Female, age 91, both hemispheres 18.9
1990 Female, age 91, right hemisphere 18.8
1850 Male, age 80, both hemispheres 18.1
2693 Female, age 94, both hemispheres 18.1
2532 Female, age 72, left hemisphere 17.5
Perirhinal gyrus
nTPM: 18.3
1794 Male, age 80, right hemisphere 19.1
1841 Female, age 85, right hemisphere 18.5
1847 Female, age 91, left hemisphere 18.2
2521 Female, age 94, right hemisphere 18.0
2848 Male, age 76, right hemisphere 17.7
Subiculum
nTPM: 20.0
2729 Female, age 91, right hemisphere 23.0
2619 Male, age 74, both hemispheres 22.0
2438 Female, age 94, left hemisphere 20.1
1977 Female, age 85, both hemispheres 18.9
2042 Male, age 76, both hemispheres 18.5
1901 Male, age 80, both hemispheres 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.2
Samples: 197

Max nTPM: 32.1
Min nTPM: 3.6
Std nTPM: 4.7
Median nTPM: 11.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 32.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 26.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 24.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 22.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 22.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 22.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 22.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 22.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 21.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 21.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 21.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.5
FF:10153-102I9 76 years, female 16.4
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 6.7
Min nTPM: 3.8
Sample A Female 6.7
Sample B Female 3.8
Sample C Male 5.0
Sample D Male 4.1
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.0
Sample A Female 5.2
Sample B Female 4.1
Sample C Male 5.1
Sample D Male 3.0
Subiculum
nTPM: 4.8
Samples: 4

Max nTPM: 5.8
Min nTPM: 3.9
Sample A Female 5.8
Sample B Female 3.9
Sample C Male 4.5
Sample D Male 5.0
Ventral hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 3.6
Sample A Female 5.1
Sample B Female 3.6
Sample C Male 6.5
Sample D Male 5.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.1
Sample A Male 6.8
Sample B Male 5.1
Sample C Female 6.3
Sample D Female 6.4
Hippocampal formation
nTPM: 5.9
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.5
Sample A Male 5.5
Sample B Male 6.0
Sample C Female 5.5
Sample D Female 6.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
2220 Antisense, RP_040604_02_A07, Mouse strain C57BL/6J (56 days, male) 1.3
100144163 Antisense, RP_110421_02_A06, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.