COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.9 nTPM
HPA:2.8 nTPM
GTEx:11.9 nTPM
FANTOM5:25.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 2.8
overview
Male, age 54 		Colon sample 67
nTPM: 9.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 4.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 8.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 0.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 0.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 0.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 0.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 11.9
Samples: 373

Max nTPM: 30.3
Min nTPM: 3.4
Std nTPM: 3.7
Median nTPM: 11.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 30.3
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 29.2
GTEX-1PIEJ-1826-SM-EWRMN 20-29 years, female 25.8
GTEX-1EU9M-2726-SM-7P8QD 60-69 years, male 23.4
GTEX-WRHK-1126-SM-4MVOJ 20-29 years, female 23.0
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 21.5
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 20.7
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 20.7
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 20.2
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 20.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 20.0
Show allShow less
Colon - Transverse
Average nTPM: 10.6
Samples: 406

Max nTPM: 28.0
Min nTPM: 2.7
Std nTPM: 3.3
Median nTPM: 10.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 28.0
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 25.5
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 20.5
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 19.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 19.4
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 19.0
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 18.7
GTEX-1I4MK-1126-SM-B2LWS 50-59 years, female 18.7
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 18.7
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 18.6
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 18.2
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 25.2
FF:10014-101C5 62,83,84 years, mixed 25.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.