HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.0 nTPM
HPA:15.0 nTPM
GTEx:10.5 nTPM
FANTOM5:63.3 Scaled Tags Per Million
Pig:26.3 nTPM
Mouse:19.5 nTPM
Allen mouse:18.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029226
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
1898 Male, age 80, left hemisphere 15.0
1855 Male, age 76, left hemisphere 13.9
2529 Female, age 94, left hemisphere 12.3
1911 Female, age 85, right hemisphere 12.1
2148 Female, age 91, left hemisphere 11.3
2621 Female, age 67, right hemisphere 11.3
Dentate gyrus
nTPM: 13.2
2010 Male, age 76, both hemispheres 15.0
2530 Female, age 94, left hemisphere 14.8
1927 Female, age 91, both hemispheres 13.7
2528 Male, age 74, both hemispheres 12.8
2246 Female, age 85, both hemispheres 12.4
2531 Female, age 67, both hemispheres 10.3
Entorhinal gyrus
nTPM: 12.8
1938 Female, age 85, left hemisphere 14.9
2117 Female, age 91, right hemisphere 13.4
1787 Male, age 76, left hemisphere 13.1
2686 Male, age 75, right hemisphere 12.4
2764 Male, age 80, right hemisphere 11.7
2613 Female, age 94, left hemisphere 11.6
Hippocampus, CA1
nTPM: 13.0
2045 Male, age 76, both hemispheres 14.2
1873 Female, age 85, both hemispheres 14.0
2527 Male, age 74, both hemispheres 13.0
2749 Male, age 80, left hemisphere 12.4
2082 Female, age 91, right hemisphere 11.6
Hippocampus, CA2
nTPM: 13.3
1892 Male, age 76, both hemispheres 15.2
2437 Female, age 94, left hemisphere 14.2
1963 Male, age 80, left hemisphere 13.3
1940 Female, age 85, left hemisphere 12.9
2249 Male, age 74, both hemispheres 12.4
2113 Female, age 91, right hemisphere 11.9
Hippocampus, CA3
nTPM: 12.2
1891 Female, age 85, both hemispheres 14.3
2137 Male, age 80, left hemisphere 13.4
1867 Male, age 76, both hemispheres 13.0
2861 Female, age 67, both hemispheres 11.1
2620 Female, age 94, left hemisphere 10.6
2436 Male, age 74, both hemispheres 10.5
Parahippocampal cortex
nTPM: 13.7
1850 Male, age 80, both hemispheres 16.0
2018 Male, age 76, both hemispheres 15.8
1933 Female, age 85, both hemispheres 14.7
1990 Female, age 91, right hemisphere 13.8
2250 Female, age 67, right hemisphere 13.4
2693 Female, age 94, both hemispheres 13.2
2532 Female, age 72, left hemisphere 13.1
2692 Male, age 74, both hemispheres 12.8
2245 Female, age 91, both hemispheres 12.0
2622 Female, age 67, right hemisphere 11.7
Perirhinal gyrus
nTPM: 15.0
1841 Female, age 85, right hemisphere 16.5
1794 Male, age 80, right hemisphere 15.6
1847 Female, age 91, left hemisphere 14.8
2848 Male, age 76, right hemisphere 14.2
2521 Female, age 94, right hemisphere 14.0
Subiculum
nTPM: 12.7
2042 Male, age 76, both hemispheres 13.3
2729 Female, age 91, right hemisphere 13.3
1977 Female, age 85, both hemispheres 12.9
1901 Male, age 80, both hemispheres 12.5
2619 Male, age 74, both hemispheres 12.2
2438 Female, age 94, left hemisphere 12.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 19.1
Min nTPM: 6.2
Std nTPM: 1.8
Median nTPM: 10.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 19.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 17.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 17.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 16.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 14.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 14.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 14.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 14.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 13.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 13.9
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 13.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.3
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 25.5
Min nTPM: 19.8
Sample A Female 25.5
Sample B Female 22.7
Sample C Male 22.5
Sample D Male 19.8
Entorhinal cortex
nTPM: 25.0
Samples: 4

Max nTPM: 27.4
Min nTPM: 23.0
Sample A Female 27.4
Sample B Female 24.0
Sample C Male 25.4
Sample D Male 23.0
Subiculum
nTPM: 26.3
Samples: 4

Max nTPM: 31.3
Min nTPM: 22.2
Sample A Female 31.3
Sample B Female 22.2
Sample C Male 23.7
Sample D Male 27.9
Ventral hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 26.6
Min nTPM: 18.1
Sample A Female 24.2
Sample B Female 18.1
Sample C Male 26.6
Sample D Male 26.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.5
Sample A Male 21.0
Sample B Male 19.5
Sample C Female 16.5
Sample D Female 21.1
Hippocampal formation
nTPM: 17.4
Samples: 4

Max nTPM: 19.4
Min nTPM: 15.8
Sample A Male 17.8
Sample B Male 19.4
Sample C Female 15.8
Sample D Female 16.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
588 Antisense, RP_Baylor_102855, Mouse strain C57BL/6J (56 days, male) 18.5
589 Antisense, RP_Baylor_102855, Mouse strain C57BL/6J (56 days, male) 14.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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