HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.9 nTPM
HPA:27.9 nTPM
GTEx:21.1 nTPM
FANTOM5:24.0 Scaled Tags Per Million
Pig:7.7 nTPM
Mouse:10.9 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036772
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.3
2621 Female, age 67, right hemisphere 28.2
2529 Female, age 94, left hemisphere 28.0
2148 Female, age 91, left hemisphere 27.4
1911 Female, age 85, right hemisphere 27.1
1898 Male, age 80, left hemisphere 27.0
1855 Male, age 76, left hemisphere 26.0
Dentate gyrus
nTPM: 27.8
2528 Male, age 74, both hemispheres 29.0
2530 Female, age 94, left hemisphere 28.1
2531 Female, age 67, both hemispheres 27.7
2010 Male, age 76, both hemispheres 27.6
1927 Female, age 91, both hemispheres 27.2
2246 Female, age 85, both hemispheres 27.2
Entorhinal gyrus
nTPM: 27.6
1787 Male, age 76, left hemisphere 28.8
2117 Female, age 91, right hemisphere 28.5
2613 Female, age 94, left hemisphere 27.9
2764 Male, age 80, right hemisphere 27.3
2686 Male, age 75, right hemisphere 27.1
1938 Female, age 85, left hemisphere 25.9
Hippocampus, CA1
nTPM: 27.1
2527 Male, age 74, both hemispheres 27.8
2082 Female, age 91, right hemisphere 27.7
2749 Male, age 80, left hemisphere 27.3
2045 Male, age 76, both hemispheres 26.6
1873 Female, age 85, both hemispheres 26.2
Hippocampus, CA2
nTPM: 27.9
1940 Female, age 85, left hemisphere 28.5
2437 Female, age 94, left hemisphere 28.4
1963 Male, age 80, left hemisphere 28.3
2249 Male, age 74, both hemispheres 27.9
2113 Female, age 91, right hemisphere 27.7
1892 Male, age 76, both hemispheres 26.6
Hippocampus, CA3
nTPM: 27.3
2861 Female, age 67, both hemispheres 29.7
1867 Male, age 76, both hemispheres 27.6
1891 Female, age 85, both hemispheres 27.0
2137 Male, age 80, left hemisphere 26.7
2436 Male, age 74, both hemispheres 26.4
2620 Female, age 94, left hemisphere 26.2
Parahippocampal cortex
nTPM: 26.8
2622 Female, age 67, right hemisphere 28.3
2692 Male, age 74, both hemispheres 28.2
2532 Female, age 72, left hemisphere 27.4
2245 Female, age 91, both hemispheres 26.9
2250 Female, age 67, right hemisphere 26.7
1933 Female, age 85, both hemispheres 26.6
1990 Female, age 91, right hemisphere 26.4
2693 Female, age 94, both hemispheres 26.4
2018 Male, age 76, both hemispheres 25.7
1850 Male, age 80, both hemispheres 25.3
Perirhinal gyrus
nTPM: 26.4
2521 Female, age 94, right hemisphere 27.5
1794 Male, age 80, right hemisphere 26.6
2848 Male, age 76, right hemisphere 26.5
1847 Female, age 91, left hemisphere 25.9
1841 Female, age 85, right hemisphere 25.4
Subiculum
nTPM: 27.4
2729 Female, age 91, right hemisphere 29.3
2619 Male, age 74, both hemispheres 28.8
2042 Male, age 76, both hemispheres 27.9
1901 Male, age 80, both hemispheres 27.4
1977 Female, age 85, both hemispheres 27.0
2438 Female, age 94, left hemisphere 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.1
Samples: 197

Max nTPM: 51.0
Min nTPM: 7.0
Std nTPM: 8.3
Median nTPM: 19.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 51.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 47.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 46.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 44.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 44.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 42.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 40.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 37.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 36.6
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 35.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.0
FF:10153-102I9 76 years, female 30.2
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 10.1
Min nTPM: 5.3
Sample A Female 10.1
Sample B Female 7.2
Sample C Male 7.8
Sample D Male 5.3
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.1
Sample A Female 6.5
Sample B Female 6.4
Sample C Male 7.5
Sample D Male 5.1
Subiculum
nTPM: 7.3
Samples: 4

Max nTPM: 10.3
Min nTPM: 5.8
Sample A Female 10.3
Sample B Female 6.9
Sample C Male 6.1
Sample D Male 5.8
Ventral hippocampus
nTPM: 7.7
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.5
Sample A Female 7.9
Sample B Female 6.7
Sample C Male 9.6
Sample D Male 6.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 10.1
Min nTPM: 8.3
Sample A Male 10.1
Sample B Male 10.1
Sample C Female 8.7
Sample D Female 8.3
Hippocampal formation
nTPM: 10.9
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 11.3
Sample C Female 11.6
Sample D Female 11.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
67792185 Antisense, RP_040920_01_C03, Mouse strain C57BL/6J (56 days, male) 2.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.