HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:2271.3 nTPM
HPA:2271.3 nTPM
GTEx:1626.6 nTPM
FANTOM5:217.3 Scaled Tags Per Million
Pig:441.7 nTPM
Mouse:717.0 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049719
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2271.3
Sample id Sample description nTPM
Hippocampus
nTPM: 2271.3
1898 Male, age 80, left hemisphere 2310.7
2529 Female, age 94, left hemisphere 2300.3
2621 Female, age 67, right hemisphere 2298.1
1911 Female, age 85, right hemisphere 2253.5
1855 Male, age 76, left hemisphere 2235.4
2148 Female, age 91, left hemisphere 2230.0
Dentate gyrus
nTPM: 2256.6
2530 Female, age 94, left hemisphere 2349.8
2010 Male, age 76, both hemispheres 2284.7
2531 Female, age 67, both hemispheres 2255.9
2246 Female, age 85, both hemispheres 2243.2
1927 Female, age 91, both hemispheres 2208.1
2528 Male, age 74, both hemispheres 2197.8
Entorhinal gyrus
nTPM: 2256.8
2686 Male, age 75, right hemisphere 2327.4
2117 Female, age 91, right hemisphere 2265.4
1787 Male, age 76, left hemisphere 2264.8
1938 Female, age 85, left hemisphere 2240.3
2764 Male, age 80, right hemisphere 2239.8
2613 Female, age 94, left hemisphere 2203.1
Hippocampus, CA1
nTPM: 2237.2
2082 Female, age 91, right hemisphere 2251.3
2527 Male, age 74, both hemispheres 2241.2
2045 Male, age 76, both hemispheres 2237.8
2749 Male, age 80, left hemisphere 2233.2
1873 Female, age 85, both hemispheres 2222.4
Hippocampus, CA2
nTPM: 2245.4
1963 Male, age 80, left hemisphere 2279.0
2437 Female, age 94, left hemisphere 2266.7
1940 Female, age 85, left hemisphere 2238.9
2113 Female, age 91, right hemisphere 2237.3
1892 Male, age 76, both hemispheres 2230.6
2249 Male, age 74, both hemispheres 2219.8
Hippocampus, CA3
nTPM: 2229.6
1867 Male, age 76, both hemispheres 2264.9
1891 Female, age 85, both hemispheres 2257.8
2861 Female, age 67, both hemispheres 2254.5
2137 Male, age 80, left hemisphere 2220.2
2436 Male, age 74, both hemispheres 2208.9
2620 Female, age 94, left hemisphere 2171.1
Parahippocampal cortex
nTPM: 2237.4
2018 Male, age 76, both hemispheres 2344.5
2532 Female, age 72, left hemisphere 2255.3
2250 Female, age 67, right hemisphere 2248.5
2245 Female, age 91, both hemispheres 2241.3
2692 Male, age 74, both hemispheres 2239.5
1850 Male, age 80, both hemispheres 2226.4
1990 Female, age 91, right hemisphere 2225.1
1933 Female, age 85, both hemispheres 2220.8
2622 Female, age 67, right hemisphere 2202.4
2693 Female, age 94, both hemispheres 2170.1
Perirhinal gyrus
nTPM: 2244.0
1841 Female, age 85, right hemisphere 2261.9
1847 Female, age 91, left hemisphere 2255.1
1794 Male, age 80, right hemisphere 2253.3
2848 Male, age 76, right hemisphere 2231.5
2521 Female, age 94, right hemisphere 2218.2
Subiculum
nTPM: 2260.1
2042 Male, age 76, both hemispheres 2297.6
2438 Female, age 94, left hemisphere 2292.1
1977 Female, age 85, both hemispheres 2265.0
1901 Male, age 80, both hemispheres 2249.4
2619 Male, age 74, both hemispheres 2240.1
2729 Female, age 91, right hemisphere 2216.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1626.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1626.6
Samples: 197

Max nTPM: 3867.8
Min nTPM: 639.5
Std nTPM: 572.4
Median nTPM: 1492.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3867.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3623.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 3618.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 3262.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 3089.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 3081.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3047.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2879.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2785.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 2760.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2755.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 217.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 217.3
FF:10169-103B7 60 years, female 276.2
FF:10153-102I9 76 years, female 158.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 441.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 441.7
Samples: 4

Max nTPM: 604.9
Min nTPM: 300.8
Sample A Female 604.9
Sample B Female 369.0
Sample C Male 492.1
Sample D Male 300.8
Entorhinal cortex
nTPM: 346.5
Samples: 4

Max nTPM: 393.7
Min nTPM: 256.6
Sample A Female 347.7
Sample B Female 393.7
Sample C Male 387.9
Sample D Male 256.6
Subiculum
nTPM: 364.1
Samples: 4

Max nTPM: 517.0
Min nTPM: 286.5
Sample A Female 517.0
Sample B Female 325.2
Sample C Male 286.5
Sample D Male 327.6
Ventral hippocampus
nTPM: 382.4
Samples: 4

Max nTPM: 465.7
Min nTPM: 297.1
Sample A Female 360.4
Sample B Female 297.1
Sample C Male 465.7
Sample D Male 406.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 717.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 685.2
Samples: 4

Max nTPM: 765.3
Min nTPM: 615.4
Sample A Male 672.4
Sample B Male 615.4
Sample C Female 765.3
Sample D Female 687.5
Hippocampal formation
nTPM: 717.0
Samples: 4

Max nTPM: 878.3
Min nTPM: 643.2
Sample A Male 878.3
Sample B Male 643.2
Sample C Female 644.7
Sample D Female 701.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
100143572 Antisense, RP_110407_01_F09, Mouse strain C57BL/6J (56 days, male) 9.5

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