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RPL13A
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  • RPL13A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1966.3 nTPM
HPA:1466.5 nTPM
GTEx:1966.3 nTPM
FANTOM5:273.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA038751
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 1466.5
overview
Male, age 65
Small intestine sample 232
nTPM: 1996.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1335.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1259.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1275

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1966.3
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1966.3
Samples: 187

Max nTPM: 3785.6
Min nTPM: 1044.7
Std nTPM: 567.2
Median nTPM: 1806.0
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3785.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 3781.8
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3526.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 3353.9
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 3318.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 3293.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 3237.0
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 3187.1
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 3130.2
GTEX-183FY-1626-SM-793D8 20-29 years, male 3108.6
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 3053.9
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 3048.1
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 3033.7
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2908.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2858.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2823.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2798.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2792.9
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2770.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2711.0
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2671.0
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2664.4
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2661.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2634.1
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2633.8
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2630.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2611.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2588.0
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2583.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 2569.9
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 2567.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2539.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2516.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2497.4
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2494.1
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2474.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 2460.8
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2453.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2451.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2430.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2404.7
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2403.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2399.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 2393.3
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 2349.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 2348.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2346.6
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 2310.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2306.2
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 2283.9
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 2278.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2253.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2253.0
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 2243.4
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 2236.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 2200.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 2193.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2188.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 2181.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2177.4
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 2149.5
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 2127.5
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2125.2
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 2124.9
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2124.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2088.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2055.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 2052.7
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2036.0
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 2028.3
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2020.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 2005.0
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 2003.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1996.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1985.4
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1979.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1976.5
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1967.7
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1965.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1953.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1949.1
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1890.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1890.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1886.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1872.5
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1865.2
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1862.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1860.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1853.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1844.5
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1835.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1826.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1807.1
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1806.0
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1805.1
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1801.3
GTEX-1192X-2526-SM-59868 50-59 years, male 1795.3
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1790.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1789.4
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1780.4
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1771.2
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1761.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1759.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1755.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1754.4
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1740.3
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1732.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1728.5
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1724.5
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1722.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1721.7
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1720.0
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1703.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1697.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1689.2
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1685.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1677.8
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1677.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1675.5
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1668.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1668.2
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1665.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1665.0
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1663.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1660.1
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1659.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1657.5
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1651.4
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1648.9
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1625.0
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1611.6
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1607.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1583.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1581.9
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1578.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1577.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1576.5
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1571.5
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1564.2
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1561.8
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1557.0
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1556.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1546.4
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1537.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1506.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1496.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1489.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1484.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1477.7
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1471.4
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1455.5
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1443.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1436.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1428.5
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1424.0
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1419.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1402.6
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1398.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1393.9
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1391.3
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1391.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 1379.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1377.0
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1375.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1374.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1366.0
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1343.9
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1339.9
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1331.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1326.6
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1325.0
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1312.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1310.5
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1302.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1290.3
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1271.0
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 1261.8
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1253.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1244.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1238.2
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1233.3
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1223.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1222.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1188.2
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1165.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1150.9
GTEX-ZTSS-0926-SM-59865 40-49 years, male 1044.7
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 273.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 273.9
FF:10024-101D6 15,40,85 years, mixed 273.9

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