HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:26.9 nTPM
FANTOM5:135.2 Scaled Tags Per Million
Pig:58.8 nTPM
Mouse:32.8 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024093
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
2621 Female, age 67, right hemisphere 28.5
2529 Female, age 94, left hemisphere 16.6
2148 Female, age 91, left hemisphere 12.4
1855 Male, age 76, left hemisphere 11.5
1911 Female, age 85, right hemisphere 7.4
1898 Male, age 80, left hemisphere 2.9
Dentate gyrus
nTPM: 10.4
2531 Female, age 67, both hemispheres 16.4
2246 Female, age 85, both hemispheres 15.5
2530 Female, age 94, left hemisphere 14.4
1927 Female, age 91, both hemispheres 8.6
2010 Male, age 76, both hemispheres 4.6
2528 Male, age 74, both hemispheres 3.1
Entorhinal gyrus
nTPM: 17.9
2686 Male, age 75, right hemisphere 25.7
2613 Female, age 94, left hemisphere 23.0
2764 Male, age 80, right hemisphere 21.1
1787 Male, age 76, left hemisphere 17.9
1938 Female, age 85, left hemisphere 10.9
2117 Female, age 91, right hemisphere 8.8
Hippocampus, CA1
nTPM: 10.2
2082 Female, age 91, right hemisphere 13.8
2527 Male, age 74, both hemispheres 12.3
2749 Male, age 80, left hemisphere 9.4
1873 Female, age 85, both hemispheres 8.4
2045 Male, age 76, both hemispheres 7.2
Hippocampus, CA2
nTPM: 8.7
2113 Female, age 91, right hemisphere 13.4
1963 Male, age 80, left hemisphere 11.4
2437 Female, age 94, left hemisphere 11.0
1940 Female, age 85, left hemisphere 8.2
1892 Male, age 76, both hemispheres 6.3
2249 Male, age 74, both hemispheres 1.7
Hippocampus, CA3
nTPM: 14.1
2861 Female, age 67, both hemispheres 31.1
2620 Female, age 94, left hemisphere 23.7
2137 Male, age 80, left hemisphere 14.9
1891 Female, age 85, both hemispheres 9.7
1867 Male, age 76, both hemispheres 5.1
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 20.0
2622 Female, age 67, right hemisphere 37.3
2245 Female, age 91, both hemispheres 30.3
2532 Female, age 72, left hemisphere 23.7
2693 Female, age 94, both hemispheres 22.1
1933 Female, age 85, both hemispheres 17.1
2692 Male, age 74, both hemispheres 16.0
2018 Male, age 76, both hemispheres 15.4
2250 Female, age 67, right hemisphere 14.4
1850 Male, age 80, both hemispheres 12.7
1990 Female, age 91, right hemisphere 11.4
Perirhinal gyrus
nTPM: 19.3
2848 Male, age 76, right hemisphere 25.8
1794 Male, age 80, right hemisphere 22.1
2521 Female, age 94, right hemisphere 17.9
1841 Female, age 85, right hemisphere 17.2
1847 Female, age 91, left hemisphere 13.8
Subiculum
nTPM: 13.5
2438 Female, age 94, left hemisphere 20.5
2619 Male, age 74, both hemispheres 20.4
1977 Female, age 85, both hemispheres 12.5
1901 Male, age 80, both hemispheres 11.7
2042 Male, age 76, both hemispheres 11.7
2729 Female, age 91, right hemisphere 4.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.9
Samples: 197

Max nTPM: 41.5
Min nTPM: 14.5
Std nTPM: 4.5
Median nTPM: 26.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 41.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 41.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 37.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 37.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 36.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 36.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 35.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 35.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 35.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 34.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 34.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 135.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.2
FF:10153-102I9 76 years, female 158.5
FF:10169-103B7 60 years, female 111.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.8
Samples: 4

Max nTPM: 63.7
Min nTPM: 49.9
Sample A Female 63.7
Sample B Female 62.1
Sample C Male 49.9
Sample D Male 59.5
Entorhinal cortex
nTPM: 48.9
Samples: 4

Max nTPM: 53.2
Min nTPM: 44.4
Sample A Female 50.6
Sample B Female 47.4
Sample C Male 53.2
Sample D Male 44.4
Subiculum
nTPM: 48.1
Samples: 4

Max nTPM: 60.0
Min nTPM: 39.6
Sample A Female 60.0
Sample B Female 45.9
Sample C Male 46.9
Sample D Male 39.6
Ventral hippocampus
nTPM: 55.8
Samples: 4

Max nTPM: 69.8
Min nTPM: 48.5
Sample A Female 48.5
Sample B Female 51.2
Sample C Male 69.8
Sample D Male 53.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 34.7
Min nTPM: 24.6
Sample A Male 30.1
Sample B Male 24.6
Sample C Female 26.5
Sample D Female 34.7
Hippocampal formation
nTPM: 32.8
Samples: 4

Max nTPM: 40.8
Min nTPM: 23.9
Sample A Male 23.9
Sample B Male 36.2
Sample C Female 40.8
Sample D Female 30.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
69289805 Antisense, RP_050407_03_H07, Mouse strain C57BL/6J (56 days, male) 10.7

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