AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		55.208
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.5 nTPM
HPA:49.5 nTPM
GTEx:44.1 nTPM
FANTOM5:32.6 Scaled Tags Per Million
Pig:29.3 nTPM
Mouse:30.0 nTPM
Allen mouse:0.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA031314
Amygdala mean intensity 55.208
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 34.935
Basal medial amygdaloid nucleus 55.208
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 29.642
Cortical amygdala 45.798
Central amygdala 44.868
Medial amygdaloid nucleus 38.236

AMYGDALA - HPA Brain RNA-seq
Max nTPM 49.5
Sample id Sample description nTPM
Amygdala
nTPM: 49.5
2814 Male, age 76, right hemisphere 54.0
2514 Male, age 75, right hemisphere 51.7
1987 Female, age 91, left hemisphere 49.9
2695 Female, age 67, right hemisphere 48.9
2517 Female, age 94, left hemisphere 42.8
Basal amygdala
nTPM: 44.8
1955 Male, age 76, both hemispheres 49.8
2609 Male, age 75, right hemisphere 48.9
2243 Female, age 91, right hemisphere 47.4
2110 Male, age 80, left hemisphere 43.7
2685 Female, age 94, left hemisphere 41.7
2827 Female, age 67, right hemisphere 37.5
Central amygdala
nTPM: 47.9
1905 Male, age 76, both hemispheres 54.3
2515 Male, age 75, right hemisphere 52.8
2239 Male, age 80, left hemisphere 45.4
2701 Female, age 91, right hemisphere 45.2
2826 Female, age 94, left hemisphere 41.8
Corticomedial amygdala
nTPM: 48.9
2428 Male, age 75, right hemisphere 55.6
2240 Male, age 76, both hemispheres 53.4
2242 Female, age 91, right hemisphere 51.4
2429 Female, age 94, left hemisphere 45.9
2829 Male, age 80, left hemisphere 44.7
2535 Female, age 67, right hemisphere 42.3
Lateral amygdala
nTPM: 44.1
1883 Male, age 76, both hemispheres 51.9
2516 Male, age 75, right hemisphere 46.0
2255 Female, age 91, right hemisphere 44.4
2256 Male, age 80, left hemisphere 43.2
2534 Female, age 94, left hemisphere 41.2
2830 Female, age 67, right hemisphere 37.7
Stria terminalis, bed nucleus
nTPM: 44.7
1974 Female, age 91, both hemispheres 46.4
2201 Male, age 74, unknown 46.1
2486 Female, age 94, both hemispheres 41.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 44.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 44.1
Samples: 152

Max nTPM: 150.3
Min nTPM: 27.2
Std nTPM: 12.1
Median nTPM: 42.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 150.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 89.6
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 82.6
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 69.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 68.7
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 60.7
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 60.1
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 60.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 59.0
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 56.3
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 54.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 32.6
FF:10151-102I7 76 years, female 32.6

AMYGDALA - Pig RNA-seqi
Average nTPM 29.3
Pig sample Sample description nTPM
Amygdala
nTPM: 29.3
Samples: 4

Max nTPM: 36.8
Min nTPM: 25.1
Sample A Female 36.8
Sample B Female 27.5
Sample C Male 25.1
Sample D Male 27.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 30.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 30.0
Samples: 4

Max nTPM: 31.3
Min nTPM: 27.9
Sample A Male 31.0
Sample B Male 29.9
Sample C Female 27.9
Sample D Female 31.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.4
70918988 Antisense, RP_050712_04_H08, Mouse strain C57BL/6J (56 days, male) 0.8
633689 Antisense, RP_040907_02_B09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.