HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.5 nTPM
HPA:42.5 nTPM
GTEx:54.9 nTPM
FANTOM5:49.1 Scaled Tags Per Million
Pig:55.9 nTPM
Mouse:101.3 nTPM
Allen mouse:25.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020559Antibody CAB026297
Glial cells HighLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.5
Sample id Sample description nTPM
Hippocampus
nTPM: 42.5
2529 Female, age 94, left hemisphere 47.1
1898 Male, age 80, left hemisphere 42.9
2621 Female, age 67, right hemisphere 41.5
1911 Female, age 85, right hemisphere 41.4
1855 Male, age 76, left hemisphere 41.2
2148 Female, age 91, left hemisphere 41.2
Dentate gyrus
nTPM: 40.8
2530 Female, age 94, left hemisphere 49.1
2246 Female, age 85, both hemispheres 41.7
2010 Male, age 76, both hemispheres 41.5
2531 Female, age 67, both hemispheres 39.2
2528 Male, age 74, both hemispheres 38.0
1927 Female, age 91, both hemispheres 35.2
Entorhinal gyrus
nTPM: 38.6
2117 Female, age 91, right hemisphere 43.5
1938 Female, age 85, left hemisphere 41.1
2686 Male, age 75, right hemisphere 39.3
1787 Male, age 76, left hemisphere 37.9
2764 Male, age 80, right hemisphere 35.1
2613 Female, age 94, left hemisphere 34.8
Hippocampus, CA1
nTPM: 40.6
2527 Male, age 74, both hemispheres 44.4
2749 Male, age 80, left hemisphere 41.9
1873 Female, age 85, both hemispheres 41.6
2045 Male, age 76, both hemispheres 38.3
2082 Female, age 91, right hemisphere 36.7
Hippocampus, CA2
nTPM: 39.5
1940 Female, age 85, left hemisphere 41.9
1892 Male, age 76, both hemispheres 41.2
2249 Male, age 74, both hemispheres 41.2
2437 Female, age 94, left hemisphere 39.4
2113 Female, age 91, right hemisphere 37.9
1963 Male, age 80, left hemisphere 35.5
Hippocampus, CA3
nTPM: 38.4
1891 Female, age 85, both hemispheres 41.8
2137 Male, age 80, left hemisphere 40.4
1867 Male, age 76, both hemispheres 39.8
2436 Male, age 74, both hemispheres 38.5
2861 Female, age 67, both hemispheres 35.4
2620 Female, age 94, left hemisphere 34.3
Parahippocampal cortex
nTPM: 38.5
2245 Female, age 91, both hemispheres 44.8
2532 Female, age 72, left hemisphere 41.2
2250 Female, age 67, right hemisphere 40.5
1850 Male, age 80, both hemispheres 38.7
2692 Male, age 74, both hemispheres 38.6
1933 Female, age 85, both hemispheres 37.9
2018 Male, age 76, both hemispheres 37.8
2622 Female, age 67, right hemisphere 37.2
1990 Female, age 91, right hemisphere 36.4
2693 Female, age 94, both hemispheres 32.1
Perirhinal gyrus
nTPM: 36.8
1841 Female, age 85, right hemisphere 38.9
1794 Male, age 80, right hemisphere 37.0
2848 Male, age 76, right hemisphere 36.7
2521 Female, age 94, right hemisphere 36.4
1847 Female, age 91, left hemisphere 34.8
Subiculum
nTPM: 39.7
1901 Male, age 80, both hemispheres 42.8
2438 Female, age 94, left hemisphere 41.1
2042 Male, age 76, both hemispheres 40.8
1977 Female, age 85, both hemispheres 39.2
2619 Male, age 74, both hemispheres 38.1
2729 Female, age 91, right hemisphere 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.9
Samples: 197

Max nTPM: 103.8
Min nTPM: 35.4
Std nTPM: 10.4
Median nTPM: 53.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 103.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 85.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 82.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 80.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 80.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 80.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 79.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 77.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 77.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 76.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 76.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.1
FF:10153-102I9 76 years, female 58.4
FF:10169-103B7 60 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.9
Samples: 4

Max nTPM: 63.8
Min nTPM: 48.5
Sample A Female 63.8
Sample B Female 52.4
Sample C Male 58.8
Sample D Male 48.5
Entorhinal cortex
nTPM: 51.5
Samples: 4

Max nTPM: 56.5
Min nTPM: 46.1
Sample A Female 50.9
Sample B Female 56.5
Sample C Male 52.4
Sample D Male 46.1
Subiculum
nTPM: 52.2
Samples: 4

Max nTPM: 66.5
Min nTPM: 45.0
Sample A Female 66.5
Sample B Female 49.5
Sample C Male 45.0
Sample D Male 47.7
Ventral hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 52.4
Min nTPM: 40.3
Sample A Female 52.4
Sample B Female 40.3
Sample C Male 46.4
Sample D Male 52.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 101.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.1
Samples: 4

Max nTPM: 108.0
Min nTPM: 89.1
Sample A Male 97.9
Sample B Male 108.0
Sample C Female 89.1
Sample D Female 93.4
Hippocampal formation
nTPM: 101.3
Samples: 4

Max nTPM: 113.1
Min nTPM: 93.9
Sample A Male 98.3
Sample B Male 113.1
Sample C Female 100.0
Sample D Female 93.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.7
532664 Antisense, RP_040825_01_B10, Mouse strain C57BL/6J (56 days, male) 25.7

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