HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:100.7 nTPM
HPA:100.7 nTPM
GTEx:85.3 nTPM
FANTOM5:326.2 Scaled Tags Per Million
Pig:134.5 nTPM
Mouse:302.7 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029754Antibody CAB010363
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 100.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.8
1898 Male, age 80, left hemisphere 70.5
1911 Female, age 85, right hemisphere 46.7
2621 Female, age 67, right hemisphere 46.2
1855 Male, age 76, left hemisphere 45.0
2148 Female, age 91, left hemisphere 34.7
2529 Female, age 94, left hemisphere 31.9
Dentate gyrus
nTPM: 60.6
1927 Female, age 91, both hemispheres 81.3
2531 Female, age 67, both hemispheres 63.1
2010 Male, age 76, both hemispheres 61.4
2246 Female, age 85, both hemispheres 61.3
2528 Male, age 74, both hemispheres 49.5
2530 Female, age 94, left hemisphere 47.3
Entorhinal gyrus
nTPM: 57.1
1938 Female, age 85, left hemisphere 80.8
2764 Male, age 80, right hemisphere 68.6
1787 Male, age 76, left hemisphere 64.8
2613 Female, age 94, left hemisphere 46.5
2686 Male, age 75, right hemisphere 43.1
2117 Female, age 91, right hemisphere 39.2
Hippocampus, CA1
nTPM: 63.7
2045 Male, age 76, both hemispheres 104.5
1873 Female, age 85, both hemispheres 73.4
2749 Male, age 80, left hemisphere 66.4
2527 Male, age 74, both hemispheres 40.3
2082 Female, age 91, right hemisphere 33.8
Hippocampus, CA2
nTPM: 48.9
1892 Male, age 76, both hemispheres 83.0
1963 Male, age 80, left hemisphere 48.7
2437 Female, age 94, left hemisphere 47.2
2249 Male, age 74, both hemispheres 46.4
1940 Female, age 85, left hemisphere 37.5
2113 Female, age 91, right hemisphere 30.8
Hippocampus, CA3
nTPM: 48.7
1867 Male, age 76, both hemispheres 70.6
1891 Female, age 85, both hemispheres 68.0
2137 Male, age 80, left hemisphere 50.8
2620 Female, age 94, left hemisphere 43.4
2436 Male, age 74, both hemispheres 33.2
2861 Female, age 67, both hemispheres 26.3
Parahippocampal cortex
nTPM: 61.4
1850 Male, age 80, both hemispheres 100.7
1933 Female, age 85, both hemispheres 78.8
2693 Female, age 94, both hemispheres 78.8
1990 Female, age 91, right hemisphere 66.8
2018 Male, age 76, both hemispheres 64.8
2532 Female, age 72, left hemisphere 64.8
2250 Female, age 67, right hemisphere 58.8
2245 Female, age 91, both hemispheres 47.8
2692 Male, age 74, both hemispheres 30.7
2622 Female, age 67, right hemisphere 21.9
Perirhinal gyrus
nTPM: 100.7
1841 Female, age 85, right hemisphere 116.6
1794 Male, age 80, right hemisphere 105.4
2848 Male, age 76, right hemisphere 98.6
1847 Female, age 91, left hemisphere 98.2
2521 Female, age 94, right hemisphere 84.8
Subiculum
nTPM: 48.4
1977 Female, age 85, both hemispheres 77.6
1901 Male, age 80, both hemispheres 53.2
2438 Female, age 94, left hemisphere 52.5
2729 Female, age 91, right hemisphere 42.1
2042 Male, age 76, both hemispheres 36.3
2619 Male, age 74, both hemispheres 28.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.3
Samples: 197

Max nTPM: 161.4
Min nTPM: 26.8
Std nTPM: 25.2
Median nTPM: 81.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 161.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 155.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 154.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 151.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 150.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 149.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 145.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 140.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 138.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 135.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 131.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 326.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 326.2
FF:10169-103B7 60 years, female 424.8
FF:10153-102I9 76 years, female 227.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 134.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 104.1
Samples: 4

Max nTPM: 114.6
Min nTPM: 83.7
Sample A Female 112.1
Sample B Female 114.6
Sample C Male 106.1
Sample D Male 83.7
Entorhinal cortex
nTPM: 134.5
Samples: 4

Max nTPM: 148.7
Min nTPM: 117.0
Sample A Female 136.6
Sample B Female 148.7
Sample C Male 135.6
Sample D Male 117.0
Subiculum
nTPM: 119.6
Samples: 4

Max nTPM: 147.8
Min nTPM: 109.1
Sample A Female 147.8
Sample B Female 109.1
Sample C Male 111.1
Sample D Male 110.3
Ventral hippocampus
nTPM: 99.5
Samples: 4

Max nTPM: 108.4
Min nTPM: 94.3
Sample A Female 108.4
Sample B Female 94.3
Sample C Male 100.8
Sample D Male 94.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 302.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 302.6
Samples: 4

Max nTPM: 343.8
Min nTPM: 251.7
Sample A Male 287.5
Sample B Male 327.5
Sample C Female 251.7
Sample D Female 343.8
Hippocampal formation
nTPM: 156.2
Samples: 4

Max nTPM: 188.8
Min nTPM: 130.8
Sample A Male 188.8
Sample B Male 150.6
Sample C Female 130.8
Sample D Female 154.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
75043158 Antisense, RP_060412_05_B09, Mouse strain C57BL/6J (56 days, male) 6.8
73424011 Antisense, RP_051019_03_C04, Mouse strain C57BL/6J (56 days, male) 5.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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