HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:924.3 nTPM
HPA:924.3 nTPM
GTEx:770.2 nTPM
FANTOM5:12.2 Scaled Tags Per Million
Pig:212.3 nTPM
Mouse:505.6 nTPM
Allen mouse:10.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 924.3
Sample id Sample description nTPM
Hippocampus
nTPM: 924.3
1898 Male, age 80, left hemisphere 953.1
2529 Female, age 94, left hemisphere 929.3
2621 Female, age 67, right hemisphere 928.2
1855 Male, age 76, left hemisphere 918.7
1911 Female, age 85, right hemisphere 914.5
2148 Female, age 91, left hemisphere 902.2
Dentate gyrus
nTPM: 923.5
2530 Female, age 94, left hemisphere 965.3
2010 Male, age 76, both hemispheres 936.3
2531 Female, age 67, both hemispheres 913.3
1927 Female, age 91, both hemispheres 913.2
2528 Male, age 74, both hemispheres 910.2
2246 Female, age 85, both hemispheres 902.6
Entorhinal gyrus
nTPM: 923.9
2686 Male, age 75, right hemisphere 955.0
2117 Female, age 91, right hemisphere 929.7
1787 Male, age 76, left hemisphere 924.3
2764 Male, age 80, right hemisphere 921.0
1938 Female, age 85, left hemisphere 920.2
2613 Female, age 94, left hemisphere 893.2
Hippocampus, CA1
nTPM: 914.6
2045 Male, age 76, both hemispheres 930.0
2082 Female, age 91, right hemisphere 925.2
1873 Female, age 85, both hemispheres 921.1
2527 Male, age 74, both hemispheres 898.4
2749 Male, age 80, left hemisphere 898.4
Hippocampus, CA2
nTPM: 922.6
1963 Male, age 80, left hemisphere 938.4
1940 Female, age 85, left hemisphere 928.4
1892 Male, age 76, both hemispheres 927.7
2113 Female, age 91, right hemisphere 916.2
2249 Male, age 74, both hemispheres 914.8
2437 Female, age 94, left hemisphere 910.1
Hippocampus, CA3
nTPM: 904.7
1867 Male, age 76, both hemispheres 931.8
1891 Female, age 85, both hemispheres 928.4
2861 Female, age 67, both hemispheres 903.4
2436 Male, age 74, both hemispheres 896.2
2137 Male, age 80, left hemisphere 889.3
2620 Female, age 94, left hemisphere 879.1
Parahippocampal cortex
nTPM: 905.9
2018 Male, age 76, both hemispheres 951.8
1850 Male, age 80, both hemispheres 917.7
2250 Female, age 67, right hemisphere 915.7
1933 Female, age 85, both hemispheres 914.9
1990 Female, age 91, right hemisphere 909.2
2532 Female, age 72, left hemisphere 899.4
2692 Male, age 74, both hemispheres 895.2
2245 Female, age 91, both hemispheres 890.2
2693 Female, age 94, both hemispheres 886.5
2622 Female, age 67, right hemisphere 878.9
Perirhinal gyrus
nTPM: 917.3
1841 Female, age 85, right hemisphere 930.0
1847 Female, age 91, left hemisphere 925.9
1794 Male, age 80, right hemisphere 921.1
2848 Male, age 76, right hemisphere 914.8
2521 Female, age 94, right hemisphere 894.7
Subiculum
nTPM: 917.4
2042 Male, age 76, both hemispheres 946.5
1977 Female, age 85, both hemispheres 929.8
2729 Female, age 91, right hemisphere 917.1
1901 Male, age 80, both hemispheres 914.1
2619 Male, age 74, both hemispheres 899.0
2438 Female, age 94, left hemisphere 897.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 770.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 770.2
Samples: 197

Max nTPM: 2338.1
Min nTPM: 355.2
Std nTPM: 275.9
Median nTPM: 706.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2338.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1949.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1675.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1606.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1540.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1487.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1401.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1383.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1293.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1284.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 1264.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.2
FF:10153-102I9 76 years, female 12.9
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 212.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 212.3
Samples: 4

Max nTPM: 281.5
Min nTPM: 132.7
Sample A Female 281.5
Sample B Female 192.9
Sample C Male 241.9
Sample D Male 132.7
Entorhinal cortex
nTPM: 179.8
Samples: 4

Max nTPM: 235.2
Min nTPM: 130.7
Sample A Female 144.9
Sample B Female 235.2
Sample C Male 208.3
Sample D Male 130.7
Subiculum
nTPM: 180.2
Samples: 4

Max nTPM: 251.5
Min nTPM: 148.3
Sample A Female 251.5
Sample B Female 170.0
Sample C Male 148.3
Sample D Male 150.8
Ventral hippocampus
nTPM: 183.1
Samples: 4

Max nTPM: 225.6
Min nTPM: 152.5
Sample A Female 186.9
Sample B Female 152.5
Sample C Male 225.6
Sample D Male 167.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 505.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 495.3
Samples: 4

Max nTPM: 522.4
Min nTPM: 452.7
Sample A Male 505.7
Sample B Male 500.5
Sample C Female 522.4
Sample D Female 452.7
Hippocampal formation
nTPM: 505.6
Samples: 4

Max nTPM: 572.7
Min nTPM: 463.1
Sample A Male 572.7
Sample B Male 463.1
Sample C Female 479.2
Sample D Female 507.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.5
69549280 Antisense, RP_050126_02_C10, Mouse strain C57BL/6J (56 days, male) 10.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.