HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:117.4 nTPM
HPA:117.4 nTPM
GTEx:150.2 nTPM
FANTOM5:413.4 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:269.8 nTPM
Allen mouse:21.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061638Antibody CAB022345
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 117.4
Sample id Sample description nTPM
Hippocampus
nTPM: 98.5
1898 Male, age 80, left hemisphere 120.7
1911 Female, age 85, right hemisphere 102.1
1855 Male, age 76, left hemisphere 101.0
2621 Female, age 67, right hemisphere 97.8
2529 Female, age 94, left hemisphere 84.7
2148 Female, age 91, left hemisphere 84.4
Dentate gyrus
nTPM: 95.1
1927 Female, age 91, both hemispheres 109.5
2010 Male, age 76, both hemispheres 109.1
2530 Female, age 94, left hemisphere 98.6
2246 Female, age 85, both hemispheres 91.3
2528 Male, age 74, both hemispheres 87.3
2531 Female, age 67, both hemispheres 75.0
Entorhinal gyrus
nTPM: 98.1
2613 Female, age 94, left hemisphere 107.1
2764 Male, age 80, right hemisphere 107.1
1938 Female, age 85, left hemisphere 105.1
1787 Male, age 76, left hemisphere 97.9
2686 Male, age 75, right hemisphere 86.7
2117 Female, age 91, right hemisphere 84.5
Hippocampus, CA1
nTPM: 113.5
2749 Male, age 80, left hemisphere 200.8
1873 Female, age 85, both hemispheres 111.6
2527 Male, age 74, both hemispheres 95.3
2082 Female, age 91, right hemisphere 82.7
2045 Male, age 76, both hemispheres 77.0
Hippocampus, CA2
nTPM: 104.0
1963 Male, age 80, left hemisphere 130.1
1892 Male, age 76, both hemispheres 127.2
2437 Female, age 94, left hemisphere 95.6
2249 Male, age 74, both hemispheres 95.5
1940 Female, age 85, left hemisphere 88.7
2113 Female, age 91, right hemisphere 87.1
Hippocampus, CA3
nTPM: 107.8
2137 Male, age 80, left hemisphere 190.3
1867 Male, age 76, both hemispheres 108.0
1891 Female, age 85, both hemispheres 93.9
2436 Male, age 74, both hemispheres 93.0
2861 Female, age 67, both hemispheres 85.4
2620 Female, age 94, left hemisphere 75.9
Parahippocampal cortex
nTPM: 103.1
1850 Male, age 80, both hemispheres 129.6
2245 Female, age 91, both hemispheres 111.3
2250 Female, age 67, right hemisphere 108.3
2532 Female, age 72, left hemisphere 104.8
1933 Female, age 85, both hemispheres 103.8
1990 Female, age 91, right hemisphere 101.5
2693 Female, age 94, both hemispheres 98.7
2622 Female, age 67, right hemisphere 94.2
2018 Male, age 76, both hemispheres 93.2
2692 Male, age 74, both hemispheres 85.8
Perirhinal gyrus
nTPM: 117.4
1841 Female, age 85, right hemisphere 127.6
1794 Male, age 80, right hemisphere 125.0
1847 Female, age 91, left hemisphere 119.9
2521 Female, age 94, right hemisphere 110.3
2848 Male, age 76, right hemisphere 104.4
Subiculum
nTPM: 97.0
1901 Male, age 80, both hemispheres 123.9
2042 Male, age 76, both hemispheres 98.7
1977 Female, age 85, both hemispheres 97.6
2438 Female, age 94, left hemisphere 96.5
2619 Male, age 74, both hemispheres 84.2
2729 Female, age 91, right hemisphere 81.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 150.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 150.2
Samples: 197

Max nTPM: 534.3
Min nTPM: 33.9
Std nTPM: 99.0
Median nTPM: 129.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 534.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 478.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 464.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 438.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 418.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 408.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 371.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 367.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 361.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 359.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 357.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 413.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 413.4
FF:10169-103B7 60 years, female 607.9
FF:10153-102I9 76 years, female 218.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 20.4
Min nTPM: 3.8
Sample A Female 20.4
Sample B Female 10.3
Sample C Male 7.3
Sample D Male 3.8
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 19.2
Min nTPM: 7.6
Sample A Female 19.2
Sample B Female 7.6
Sample C Male 13.6
Sample D Male 11.9
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 19.0
Min nTPM: 2.7
Sample A Female 19.0
Sample B Female 9.0
Sample C Male 7.0
Sample D Male 2.7
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 13.1
Min nTPM: 5.1
Sample A Female 13.1
Sample B Female 5.9
Sample C Male 12.1
Sample D Male 5.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 269.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 269.8
Samples: 4

Max nTPM: 307.2
Min nTPM: 223.1
Sample A Male 257.0
Sample B Male 307.2
Sample C Female 223.1
Sample D Female 292.0
Hippocampal formation
nTPM: 201.5
Samples: 4

Max nTPM: 249.4
Min nTPM: 174.3
Sample A Male 249.4
Sample B Male 204.2
Sample C Female 174.3
Sample D Female 178.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.2
2385 Antisense, RP_040324_01_A06, Mouse strain C57BL/6J (56 days, male) 21.2
2386 Antisense, RP_040324_01_A06, Mouse strain C57BL/6J (56 days, male) 18.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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