HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.4 nTPM
HPA:46.4 nTPM
GTEx:21.7 nTPM
FANTOM5:100.4 Scaled Tags Per Million
Pig:46.7 nTPM
Mouse:74.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA078775
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.4
Sample id Sample description nTPM
Hippocampus
nTPM: 46.1
2529 Female, age 94, left hemisphere 49.5
1898 Male, age 80, left hemisphere 47.7
2621 Female, age 67, right hemisphere 46.3
2148 Female, age 91, left hemisphere 44.7
1911 Female, age 85, right hemisphere 44.3
1855 Male, age 76, left hemisphere 44.1
Dentate gyrus
nTPM: 45.0
2010 Male, age 76, both hemispheres 48.2
2246 Female, age 85, both hemispheres 47.3
2528 Male, age 74, both hemispheres 47.3
2530 Female, age 94, left hemisphere 45.1
1927 Female, age 91, both hemispheres 44.1
2531 Female, age 67, both hemispheres 37.8
Entorhinal gyrus
nTPM: 43.6
2117 Female, age 91, right hemisphere 48.3
1938 Female, age 85, left hemisphere 46.2
1787 Male, age 76, left hemisphere 44.7
2764 Male, age 80, right hemisphere 42.3
2613 Female, age 94, left hemisphere 41.2
2686 Male, age 75, right hemisphere 38.8
Hippocampus, CA1
nTPM: 45.3
2527 Male, age 74, both hemispheres 49.2
2749 Male, age 80, left hemisphere 46.5
1873 Female, age 85, both hemispheres 45.9
2045 Male, age 76, both hemispheres 43.0
2082 Female, age 91, right hemisphere 42.1
Hippocampus, CA2
nTPM: 46.4
2249 Male, age 74, both hemispheres 57.4
1940 Female, age 85, left hemisphere 45.5
1963 Male, age 80, left hemisphere 44.0
2113 Female, age 91, right hemisphere 43.9
2437 Female, age 94, left hemisphere 43.9
1892 Male, age 76, both hemispheres 43.8
Hippocampus, CA3
nTPM: 44.6
2436 Male, age 74, both hemispheres 58.1
1867 Male, age 76, both hemispheres 43.3
1891 Female, age 85, both hemispheres 43.1
2137 Male, age 80, left hemisphere 42.7
2620 Female, age 94, left hemisphere 42.3
2861 Female, age 67, both hemispheres 38.1
Parahippocampal cortex
nTPM: 44.5
2250 Female, age 67, right hemisphere 49.5
2018 Male, age 76, both hemispheres 47.0
1933 Female, age 85, both hemispheres 46.6
2532 Female, age 72, left hemisphere 46.3
2245 Female, age 91, both hemispheres 44.4
1990 Female, age 91, right hemisphere 43.0
1850 Male, age 80, both hemispheres 42.5
2622 Female, age 67, right hemisphere 42.5
2692 Male, age 74, both hemispheres 42.5
2693 Female, age 94, both hemispheres 41.1
Perirhinal gyrus
nTPM: 44.1
1794 Male, age 80, right hemisphere 46.3
2521 Female, age 94, right hemisphere 45.9
1847 Female, age 91, left hemisphere 43.9
1841 Female, age 85, right hemisphere 43.6
2848 Male, age 76, right hemisphere 40.5
Subiculum
nTPM: 46.0
2729 Female, age 91, right hemisphere 49.6
2619 Male, age 74, both hemispheres 48.1
1977 Female, age 85, both hemispheres 46.3
2042 Male, age 76, both hemispheres 45.2
2438 Female, age 94, left hemisphere 44.5
1901 Male, age 80, both hemispheres 42.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.7
Samples: 197

Max nTPM: 46.5
Min nTPM: 4.8
Std nTPM: 5.8
Median nTPM: 21.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 46.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 41.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 35.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 35.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 33.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 31.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.8
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 31.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 31.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.4
FF:10169-103B7 60 years, female 111.9
FF:10153-102I9 76 years, female 88.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.7
Samples: 4

Max nTPM: 49.0
Min nTPM: 45.1
Sample A Female 45.1
Sample B Female 45.3
Sample C Male 49.0
Sample D Male 47.3
Entorhinal cortex
nTPM: 46.5
Samples: 4

Max nTPM: 49.8
Min nTPM: 45.0
Sample A Female 45.0
Sample B Female 45.7
Sample C Male 45.5
Sample D Male 49.8
Subiculum
nTPM: 44.9
Samples: 4

Max nTPM: 49.5
Min nTPM: 39.2
Sample A Female 39.2
Sample B Female 44.5
Sample C Male 46.4
Sample D Male 49.5
Ventral hippocampus
nTPM: 43.2
Samples: 4

Max nTPM: 47.3
Min nTPM: 34.7
Sample A Female 46.6
Sample B Female 47.3
Sample C Male 34.7
Sample D Male 44.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.4
Samples: 4

Max nTPM: 74.4
Min nTPM: 60.4
Sample A Male 63.6
Sample B Male 60.4
Sample C Female 74.4
Sample D Female 67.1
Hippocampal formation
nTPM: 74.9
Samples: 4

Max nTPM: 81.9
Min nTPM: 68.9
Sample A Male 81.9
Sample B Male 68.9
Sample C Female 72.2
Sample D Female 76.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
386233 Antisense, RP_040804_01_C05, Mouse strain C57BL/6J (56 days, male) 1.0

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