COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.4 nTPM
HPA:17.3 nTPM
GTEx:45.4 nTPM
FANTOM5:29.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA006800Antibody HPA008781
Endothelial cells MediumNot detected
Glandular cells HighMedium
Peripheral nerve/ganglion Medium-

COLON - HPA RNA-seqi
Average nTPM 17.3
overview
Male, age 54 		Colon sample 67
nTPM: 14.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 17.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 16.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 16.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 13.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 17.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 21.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 18.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 18.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 14
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 19.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 16.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 22
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 45.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 45.4
Samples: 373

Max nTPM: 95.1
Min nTPM: 11.2
Std nTPM: 14.1
Median nTPM: 43.8
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 95.1
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 90.6
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 87.9
GTEX-1JMLX-2526-SM-CY8HX 50-59 years, male 85.2
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 81.7
GTEX-15EO6-2326-SM-6LPKK 50-59 years, male 79.8
GTEX-1HBPM-2626-SM-9WYU5 60-69 years, female 78.5
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 76.5
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 76.2
GTEX-1GMR3-2526-SM-7P8QS 40-49 years, male 73.9
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 73.5
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Colon - Transverse
Average nTPM: 31.0
Samples: 406

Max nTPM: 79.3
Min nTPM: 11.6
Std nTPM: 11.0
Median nTPM: 28.7
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 79.3
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 68.2
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 66.9
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 65.9
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 65.1
GTEX-18A7A-2226-SM-7LT8K 50-59 years, female 63.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 63.0
GTEX-17MF6-2426-SM-7LTAM 40-49 years, male 59.4
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 57.9
GTEX-1QMI2-2626-SM-E6CR4 60-69 years, male 57.8
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 56.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 29.3
FF:10014-101C5 62,83,84 years, mixed 29.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.