HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:69.0 nTPM
HPA:69.0 nTPM
GTEx:51.4 nTPM
FANTOM5:80.6 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:101.4 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058296
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.0
Sample id Sample description nTPM
Hippocampus
nTPM: 50.7
2621 Female, age 67, right hemisphere 72.4
2148 Female, age 91, left hemisphere 60.1
1855 Male, age 76, left hemisphere 59.1
1898 Male, age 80, left hemisphere 56.4
1911 Female, age 85, right hemisphere 38.5
2529 Female, age 94, left hemisphere 18.0
Dentate gyrus
nTPM: 55.4
1927 Female, age 91, both hemispheres 79.9
2010 Male, age 76, both hemispheres 64.0
2530 Female, age 94, left hemisphere 57.1
2531 Female, age 67, both hemispheres 54.9
2528 Male, age 74, both hemispheres 39.6
2246 Female, age 85, both hemispheres 37.1
Entorhinal gyrus
nTPM: 15.9
2613 Female, age 94, left hemisphere 26.9
1938 Female, age 85, left hemisphere 17.0
2764 Male, age 80, right hemisphere 15.3
2686 Male, age 75, right hemisphere 13.5
1787 Male, age 76, left hemisphere 13.1
2117 Female, age 91, right hemisphere 9.3
Hippocampus, CA1
nTPM: 69.0
2749 Male, age 80, left hemisphere 135.6
1873 Female, age 85, both hemispheres 66.3
2045 Male, age 76, both hemispheres 65.9
2527 Male, age 74, both hemispheres 55.3
2082 Female, age 91, right hemisphere 21.7
Hippocampus, CA2
nTPM: 39.5
1963 Male, age 80, left hemisphere 82.6
1892 Male, age 76, both hemispheres 63.6
2249 Male, age 74, both hemispheres 40.1
2437 Female, age 94, left hemisphere 27.4
2113 Female, age 91, right hemisphere 14.8
1940 Female, age 85, left hemisphere 8.3
Hippocampus, CA3
nTPM: 53.2
2137 Male, age 80, left hemisphere 89.4
2620 Female, age 94, left hemisphere 66.9
2861 Female, age 67, both hemispheres 62.2
2436 Male, age 74, both hemispheres 39.3
1867 Male, age 76, both hemispheres 37.6
1891 Female, age 85, both hemispheres 24.0
Parahippocampal cortex
nTPM: 17.0
2245 Female, age 91, both hemispheres 28.7
2693 Female, age 94, both hemispheres 25.6
2250 Female, age 67, right hemisphere 21.2
2018 Male, age 76, both hemispheres 19.2
1933 Female, age 85, both hemispheres 15.4
2622 Female, age 67, right hemisphere 15.2
1850 Male, age 80, both hemispheres 13.9
1990 Female, age 91, right hemisphere 11.8
2692 Male, age 74, both hemispheres 10.6
2532 Female, age 72, left hemisphere 8.7
Perirhinal gyrus
nTPM: 21.0
2521 Female, age 94, right hemisphere 32.3
1847 Female, age 91, left hemisphere 30.8
2848 Male, age 76, right hemisphere 14.9
1794 Male, age 80, right hemisphere 14.7
1841 Female, age 85, right hemisphere 12.5
Subiculum
nTPM: 22.4
1901 Male, age 80, both hemispheres 37.0
2729 Female, age 91, right hemisphere 29.6
2042 Male, age 76, both hemispheres 21.0
1977 Female, age 85, both hemispheres 18.1
2438 Female, age 94, left hemisphere 15.5
2619 Male, age 74, both hemispheres 13.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.4
Samples: 197

Max nTPM: 212.4
Min nTPM: 2.4
Std nTPM: 39.9
Median nTPM: 38.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 212.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 191.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 177.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 168.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 150.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 145.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 137.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 134.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 133.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 131.7
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 130.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.6
FF:10169-103B7 60 years, female 117.1
FF:10153-102I9 76 years, female 44.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 20.8
Min nTPM: 12.9
Sample A Female 20.8
Sample B Female 20.6
Sample C Male 12.9
Sample D Male 17.4
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.3
Sample A Female 14.4
Sample B Female 17.9
Sample C Male 15.3
Sample D Male 13.3
Subiculum
nTPM: 12.5
Samples: 4

Max nTPM: 16.8
Min nTPM: 9.0
Sample A Female 16.8
Sample B Female 11.4
Sample C Male 12.7
Sample D Male 9.0
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 23.0
Min nTPM: 11.1
Sample A Female 11.1
Sample B Female 11.3
Sample C Male 16.0
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 101.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.4
Samples: 4

Max nTPM: 89.7
Min nTPM: 82.5
Sample A Male 88.2
Sample B Male 85.1
Sample C Female 82.5
Sample D Female 89.7
Hippocampal formation
nTPM: 101.4
Samples: 4

Max nTPM: 111.8
Min nTPM: 90.3
Sample A Male 90.3
Sample B Male 106.0
Sample C Female 111.8
Sample D Female 97.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
75774678 Antisense, RP_060530_01_D03, Mouse strain C57BL/6J (56 days, male) 13.3
671241 Antisense, RP_040914_02_A08, Mouse strain C57BL/6J (56 days, male) 10.9

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The Human Protein Atlas

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