COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.8 nTPM
HPA:9.1 nTPM
GTEx:17.8 nTPM
FANTOM5:22.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA046680
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 9.1
overview
Male, age 54 		Colon sample 67
nTPM: 6.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 6.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 7.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 11.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 14.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 8.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 13.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 8.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 10.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 17.8
Samples: 373

Max nTPM: 42.1
Min nTPM: 5.8
Std nTPM: 5.7
Median nTPM: 17.0
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 42.1
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 41.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 41.1
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 39.7
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 36.8
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 34.6
GTEX-1C64N-2226-SM-7SB7C 50-59 years, male 34.6
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 33.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 31.7
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 31.3
GTEX-1IDJH-2826-SM-CJI49 70-79 years, male 31.3
Show allShow less
Colon - Transverse
Average nTPM: 13.8
Samples: 406

Max nTPM: 58.6
Min nTPM: 2.6
Std nTPM: 7.2
Median nTPM: 12.5
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 58.6
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 43.9
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 43.1
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 37.4
GTEX-117YX-0826-SM-5H11J 50-59 years, male 33.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 33.3
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 32.2
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 31.9
GTEX-11GSP-1626-SM-5986N 60-69 years, female 31.8
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 30.8
GTEX-NFK9-2026-SM-3LK5K 40-49 years, male 29.4
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 22.3
FF:10014-101C5 62,83,84 years, mixed 22.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.