HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:31.3 nTPM
HPA:31.3 nTPM
GTEx:38.2 nTPM
FANTOM5:67.4 Scaled Tags Per Million
Pig:44.3 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
1898 Male, age 80, left hemisphere 33.5
1855 Male, age 76, left hemisphere 31.0
2621 Female, age 67, right hemisphere 30.3
1911 Female, age 85, right hemisphere 29.0
2148 Female, age 91, left hemisphere 27.1
2529 Female, age 94, left hemisphere 26.6
Dentate gyrus
nTPM: 29.8
2010 Male, age 76, both hemispheres 34.0
2530 Female, age 94, left hemisphere 30.9
2246 Female, age 85, both hemispheres 30.1
2528 Male, age 74, both hemispheres 29.5
1927 Female, age 91, both hemispheres 29.2
2531 Female, age 67, both hemispheres 25.1
Entorhinal gyrus
nTPM: 29.3
1938 Female, age 85, left hemisphere 31.3
2117 Female, age 91, right hemisphere 31.2
2613 Female, age 94, left hemisphere 29.8
2764 Male, age 80, right hemisphere 29.2
1787 Male, age 76, left hemisphere 29.0
2686 Male, age 75, right hemisphere 25.3
Hippocampus, CA1
nTPM: 31.3
2749 Male, age 80, left hemisphere 35.9
1873 Female, age 85, both hemispheres 31.8
2527 Male, age 74, both hemispheres 30.4
2045 Male, age 76, both hemispheres 30.1
2082 Female, age 91, right hemisphere 28.2
Hippocampus, CA2
nTPM: 30.8
1892 Male, age 76, both hemispheres 32.9
2249 Male, age 74, both hemispheres 32.8
1963 Male, age 80, left hemisphere 31.6
1940 Female, age 85, left hemisphere 29.8
2113 Female, age 91, right hemisphere 29.2
2437 Female, age 94, left hemisphere 28.3
Hippocampus, CA3
nTPM: 30.3
1867 Male, age 76, both hemispheres 33.2
2436 Male, age 74, both hemispheres 32.9
2137 Male, age 80, left hemisphere 31.4
1891 Female, age 85, both hemispheres 30.4
2620 Female, age 94, left hemisphere 28.3
2861 Female, age 67, both hemispheres 25.6
Parahippocampal cortex
nTPM: 29.2
1850 Male, age 80, both hemispheres 31.3
2018 Male, age 76, both hemispheres 31.3
1933 Female, age 85, both hemispheres 30.7
2250 Female, age 67, right hemisphere 29.7
2693 Female, age 94, both hemispheres 29.6
1990 Female, age 91, right hemisphere 29.1
2245 Female, age 91, both hemispheres 28.6
2532 Female, age 72, left hemisphere 28.5
2692 Male, age 74, both hemispheres 27.9
2622 Female, age 67, right hemisphere 25.0
Perirhinal gyrus
nTPM: 31.0
1841 Female, age 85, right hemisphere 33.3
2521 Female, age 94, right hemisphere 31.6
1847 Female, age 91, left hemisphere 30.8
1794 Male, age 80, right hemisphere 30.5
2848 Male, age 76, right hemisphere 28.7
Subiculum
nTPM: 30.0
1901 Male, age 80, both hemispheres 31.8
1977 Female, age 85, both hemispheres 31.4
2042 Male, age 76, both hemispheres 30.8
2438 Female, age 94, left hemisphere 29.9
2619 Male, age 74, both hemispheres 28.3
2729 Female, age 91, right hemisphere 27.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.2
Samples: 197

Max nTPM: 62.4
Min nTPM: 18.5
Std nTPM: 8.8
Median nTPM: 36.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 62.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 59.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 57.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 56.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 55.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 55.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 55.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 54.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 54.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 54.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 53.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.4
FF:10153-102I9 76 years, female 74.2
FF:10169-103B7 60 years, female 60.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.3
Samples: 4

Max nTPM: 56.7
Min nTPM: 32.9
Sample A Female 56.7
Sample B Female 40.1
Sample C Male 47.5
Sample D Male 32.9
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.0
Sample A Female 36.4
Sample B Female 35.5
Sample C Male 30.0
Sample D Male 28.0
Subiculum
nTPM: 33.5
Samples: 4

Max nTPM: 37.6
Min nTPM: 29.8
Sample A Female 37.6
Sample B Female 32.2
Sample C Male 29.8
Sample D Male 34.2
Ventral hippocampus
nTPM: 37.4
Samples: 4

Max nTPM: 41.9
Min nTPM: 27.6
Sample A Female 40.9
Sample B Female 27.6
Sample C Male 39.3
Sample D Male 41.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.