PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:211.8 nTPM
HPA:211.8 nTPM
FANTOM5:302.1 Scaled Tags Per Million
Pig:63.3 nTPM
Mouse:45.2 nTPM
Allen mouse:0.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 211.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 114.2
2301 Female, age 85, both hemispheres 118.8
2090 Male, age 80, both hemispheres 116.1
1984 Male, age 76, both hemispheres 115.6
2188 Female, age 91, both hemispheres 106.3
Area postrema
nTPM: 211.8
2799 Male, age 61, both hemispheres 279.8
2306 Male, age 80, both hemispheres 192.4
2054 Male, age 76, both hemispheres 163.2
Cuneate nuclei
nTPM: 134.5
2376 Male, age 61, both hemispheres 149.1
2131 Male, age 76, both hemispheres 133.2
2381 Male, age 80, both hemispheres 121.2
Dorsal cochlear nucleus
nTPM: 147.7
2802 Male, age 74, right hemisphere 175.8
2370 Male, age 61, both hemispheres 161.3
2378 Male, age 80, both hemispheres 150.4
2058 Male, age 76, both hemispheres 145.4
2187 Female, age 91, both hemispheres 105.5
Dorsal medullary reticular nucleus
nTPM: 132.2
2373 Male, age 61, both hemispheres 149.2
2088 Male, age 76, both hemispheres 131.5
2040 Female, age 85, both hemispheres 115.8
Dorsal motor vagal complex
nTPM: 144.4
2797 Male, age 61, both hemispheres 206.8
2185 Male, age 76, both hemispheres 201.7
2643 Male, age 74, both hemispheres 152.3
2844 Male, age 55, unknown 135.9
2000 Male, age 74, unknown 120.7
2807 Female, age 85, both hemispheres 117.4
2813 Female, age 72, unknown 113.0
2133 Female, age 91, both hemispheres 107.7
Dorsal tegmental nucleus
nTPM: 131.8
1936 Male, age 76, left hemisphere 135.0
2326 Male, age 74, both hemispheres 134.1
2083 Male, age 80, both hemispheres 133.8
2358 Male, age 61, both hemispheres 124.5
Dorsolateral tegmental area
nTPM: 127.1
2654 Male, age 80, both hemispheres 134.5
2337 Male, age 61, both hemispheres 134.1
2751 Female, age 85, both hemispheres 128.1
2360 Male, age 74, both hemispheres 123.0
2141 Male, age 76, both hemispheres 115.7
Gigantocellular reticular nuclei, medullary
nTPM: 130.9
2314 Male, age 61, both hemispheres 163.6
2387 Female, age 91, both hemispheres 150.6
2462 Male, age 74, both hemispheres 128.6
1876 Female, age 85, both hemispheres 125.9
2310 Male, age 80, both hemispheres 113.3
2022 Male, age 76, right hemisphere 103.8
Gigantocellular reticular nuclei, pars
nTPM: 122.2
2330 Male, age 80, both hemispheres 131.7
2706 Male, age 80, both hemispheres 127.6
2336 Male, age 61, both hemispheres 125.5
2084 Female, age 85, both hemispheres 124.5
2168 Male, age 76, both hemispheres 101.8
Inferior olive
nTPM: 190.2
2379 Male, age 80, both hemispheres 207.0
2178 Male, age 61, both hemispheres 201.7
2085 Female, age 85, both hemispheres 183.8
2563 Male, age 74, both hemispheres 182.2
2628 Female, age 91, both hemispheres 176.2
Kolliker-Fuse nucleus
nTPM: 145.5
2315 Male, age 76, right hemisphere 204.9
2163 Male, age 80, both hemispheres 118.8
2793 Female, age 91, left hemisphere 112.9
Lateral lemniscal nuclei
nTPM: 111.0
2453 Male, age 74, right hemisphere 130.4
2746 Female, age 85, left hemisphere 115.8
2169 Male, age 76, both hemispheres 104.7
2320 Female, age 91, left hemisphere 103.0
2036 Male, age 80, both hemispheres 101.0
Lateral medullary reticular nucleus
nTPM: 145.0
2804 Female, age 91, both hemispheres 168.9
2374 Male, age 61, both hemispheres 168.6
2852 Male, age 80, both hemispheres 155.7
2190 Female, age 85, both hemispheres 135.2
2044 Male, age 76, both hemispheres 123.2
2305 Male, age 74, both hemispheres 118.4
Lateral parabrachial nucleus
nTPM: 139.6
2790 Male, age 61, both hemispheres 152.4
2792 Male, age 76, both hemispheres 149.5
2139 Female, age 85, right hemisphere 133.8
2013 Male, age 80, both hemispheres 122.6
Lateral vestibular nucleus
nTPM: 129.2
2311 Male, age 80, both hemispheres 130.2
2184 Male, age 76, both hemispheres 128.2
Locus coeruleus
nTPM: 103.6
2317 Female, age 72, unknown 131.3
1980 Male, age 76, both hemispheres 111.1
2788 Male, age 74, unknown 102.2
2162 Male, age 80, both hemispheres 100.3
2123 Female, age 91, both hemispheres 99.0
2014 Male, age 55, unknown 94.2
2720 Male, age 74, both hemispheres 87.1
Medial olivary nucleus
nTPM: 169.1
2138 Female, age 91, both hemispheres 200.7
1943 Male, age 61, both hemispheres 164.2
2851 Male, age 80, both hemispheres 157.2
1962 Male, age 76, both hemispheres 154.1
Medial parabrachial nucleus
nTPM: 119.7
2156 Male, age 61, both hemispheres 141.0
2463 Female, age 85, right hemisphere 125.2
2786 Male, age 76, both hemispheres 123.4
2854 Male, age 80, both hemispheres 109.3
2170 Female, age 91, both hemispheres 99.5
Medial periolivary nuclei
nTPM: 120.7
2081 Male, age 80, both hemispheres 126.5
2791 Male, age 74, right hemisphere 124.3
2458 Female, age 91, both hemispheres 121.9
2171 Female, age 85, both hemispheres 117.7
2063 Male, age 76, both hemispheres 113.1
Medial vestibular nucleus
nTPM: 122.6
2093 Male, age 80, both hemispheres 130.8
2624 Male, age 61, both hemispheres 129.8
2803 Female, age 91, both hemispheres 125.2
2801 Male, age 74, both hemispheres 117.1
2134 Male, age 76, both hemispheres 116.4
2743 Female, age 85, both hemispheres 116.4
Motor facial nucleus
nTPM: 124.5
2795 Female, age 91, both hemispheres 176.1
2126 Male, age 61, both hemispheres 130.4
2062 Male, age 76, both hemispheres 121.6
2365 Male, age 74, right hemisphere 115.1
2697 Female, age 85, both hemispheres 103.0
2327 Male, age 80, both hemispheres 100.8
Motor hypoglossal nucleus
nTPM: 118.6
2277 Male, age 76, both hemispheres 150.2
2125 Female, age 91, both hemispheres 121.9
2461 Male, age 61, both hemispheres 113.6
2182 Male, age 80, both hemispheres 106.2
2132 Female, age 85, both hemispheres 101.2
Motor trigeminal nucleus
nTPM: 114.5
2309 Male, age 76, both hemispheres 125.6
2560 Male, age 74, both hemispheres 120.3
2335 Male, age 61, both hemispheres 114.9
2079 Male, age 80, both hemispheres 108.0
2321 Female, age 91, both hemispheres 103.4
Nuclei of the trapezoid body
nTPM: 118.6
2368 Female, age 91, both hemispheres 148.0
1983 Male, age 76, both hemispheres 120.6
2735 Female, age 85, both hemispheres 116.1
2166 Male, age 80, both hemispheres 111.8
2159 Male, age 61, both hemispheres 96.3
Nucleus ambiguus
nTPM: 152.4
2071 Male, age 76, both hemispheres 185.9
2096 Female, age 85, both hemispheres 118.8
Nucleus cuneatus
nTPM: 164.0
2805 Female, age 91, both hemispheres 189.8
2564 Male, age 74, both hemispheres 168.3
2100 Male, age 76, both hemispheres 168.2
2562 Male, age 61, both hemispheres 162.3
2380 Male, age 80, both hemispheres 153.1
2808 Female, age 85, both hemispheres 142.6
Nucleus gracilis
nTPM: 159.5
2299 Female, age 85, both hemispheres 186.3
2627 Male, age 74, both hemispheres 150.3
2382 Male, age 80, both hemispheres 141.8
Nucleus raphe magnus
nTPM: 114.8
2051 Male, age 76, both hemispheres 140.1
2459 Female, age 91, both hemispheres 124.2
2455 Male, age 74, both hemispheres 113.3
2328 Male, age 80, both hemispheres 112.5
2172 Female, age 85, both hemispheres 105.6
2160 Male, age 61, both hemispheres 93.3
Nucleus raphe obscurus
nTPM: 154.0
2142 Male, age 76, midline 205.1
2800 Male, age 61, midline 138.7
2845 Female, age 85, midline 118.3
Nucleus raphe pallidus
nTPM: 141.2
1924 Male, age 61, midline 154.3
2145 Male, age 76, midline 150.7
2183 Male, age 80, midline 118.7
Nucleus tractus solitarii
nTPM: 118.0
2144 Female, age 91, right hemisphere 125.4
2656 Male, age 76, both hemispheres 123.0
2191 Female, age 85, both hemispheres 118.1
2307 Male, age 80, both hemispheres 105.5
Paramedian reticular nucleus
nTPM: 114.8
2057 Male, age 80, both hemispheres 125.1
2313 Male, age 61, both hemispheres 112.5
2050 Female, age 85, both hemispheres 111.2
2052 Male, age 76, both hemispheres 110.2
Parvicellular reticular nuclei
nTPM: 129.8
2119 Male, age 80, both hemispheres 136.2
2558 Male, age 74, both hemispheres 128.6
2095 Male, age 76, both hemispheres 124.7
Parvicellular reticular nuclei, medullary
nTPM: 123.3
2091 Female, age 85, both hemispheres 127.2
2181 Male, age 80, left hemisphere 124.1
2189 Female, age 91, both hemispheres 118.6
Peritrigeminal nucleus
nTPM: 138.3
2136 Male, age 76, both hemispheres 146.3
2067 Female, age 85, both hemispheres 142.9
2179 Male, age 61, both hemispheres 125.7
Pontine nuclei
nTPM: 111.8
2109 Female, age 72, unknown 122.6
1863 Male, age 55, unknown 121.8
2787 Female, age 85, both hemispheres 119.5
1968 Male, age 76, left hemisphere 115.8
2115 Male, age 80, left hemisphere 115.6
2727 Male, age 61, right hemisphere 100.4
2454 Male, age 74, left hemisphere 100.2
2319 Female, age 91, both hemispheres 98.1
Pontine raphe nucleus
nTPM: 113.6
2853 Male, age 76, midline 114.7
2122 Female, age 85, midline 112.4
Posteroventral cochlear nucleus
nTPM: 121.1
2371 Male, age 61, both hemispheres 148.6
2341 Male, age 80, both hemispheres 116.4
2752 Female, age 85, both hemispheres 116.2
2070 Male, age 76, both hemispheres 114.9
2135 Female, age 91, both hemispheres 109.4
Prepositus hypoglossal nucleus
nTPM: 127.0
2086 Male, age 80, both hemispheres 140.5
2855 Female, age 85, right hemisphere 113.6
Principal sensory trigeminal nucleus
nTPM: 111.0
2324 Male, age 76, both hemispheres 144.5
2008 Male, age 80, left hemisphere 104.5
2367 Female, age 91, left hemisphere 98.8
2158 Male, age 61, both hemispheres 96.4
Reticular pontine nucleus, caudal
nTPM: 121.2
2457 Female, age 91, both hemispheres 132.3
2092 Male, age 76, both hemispheres 128.6
2332 Male, age 80, right hemisphere 117.3
2559 Male, age 74, both hemispheres 106.4
Reticular pontine nucleus, oral
nTPM: 111.0
1939 Male, age 80, both hemispheres 130.6
2167 Male, age 76, both hemispheres 117.6
2012 Female, age 85, both hemispheres 113.7
2366 Female, age 91, both hemispheres 98.3
2361 Male, age 74, both hemispheres 95.0
Reticulotegmental nucleus
nTPM: 133.0
2333 Male, age 80, both hemispheres 148.3
2322 Female, age 91, both hemispheres 142.2
2452 Male, age 74, both hemispheres 132.3
2325 Male, age 76, both hemispheres 109.3
Spinal trigeminal nucleus, caudal
nTPM: 127.0
2447 Male, age 76, both hemispheres 140.0
2312 Male, age 61, both hemispheres 129.2
2308 Male, age 80, both hemispheres 125.3
2642 Male, age 74, both hemispheres 122.4
2390 Female, age 91, both hemispheres 118.3
Spinal trigeminal nucleus, interpolar
nTPM: 116.8
2389 Female, age 91, both hemispheres 125.3
2625 Male, age 61, both hemispheres 122.8
2033 Male, age 80, both hemispheres 116.7
2386 Female, age 85, both hemispheres 110.8
2066 Male, age 76, right hemisphere 108.1
Spinal trigeminal nucleus, oral
nTPM: 112.9
2164 Male, age 80, both hemispheres 123.8
1978 Male, age 76, both hemispheres 109.7
2737 Female, age 85, both hemispheres 105.3
Spinal vestibular nucleus
nTPM: 125.2
2384 Male, age 74, both hemispheres 137.8
2806 Female, age 85, both hemispheres 130.5
2796 Male, age 61, both hemispheres 129.1
2186 Female, age 91, both hemispheres 120.2
2748 Male, age 76, both hemispheres 119.1
2780 Male, age 80, both hemispheres 114.6
Subcoeruleus area
nTPM: 112.9
2369 Female, age 85, left hemisphere 133.6
2451 Male, age 74, both hemispheres 117.1
1958 Male, age 80, both hemispheres 109.8
2089 Male, age 76, left hemisphere 105.0
2323 Female, age 91, left hemisphere 99.2
Superior olive
nTPM: 111.2
2561 Female, age 91, both hemispheres 116.4
2364 Male, age 74, right hemisphere 114.0
2329 Male, age 80, right hemisphere 110.5
2020 Male, age 76, both hemispheres 110.4
1875 Female, age 85, both hemispheres 104.7
Superior vestibular nucleus
nTPM: 138.5
2061 Male, age 76, both hemispheres 164.1
2015 Male, age 80, both hemispheres 130.5
2383 Male, age 74, both hemispheres 121.0
Ventral medullary reticular nucleus
nTPM: 144.0
2372 Male, age 61, both hemispheres 171.4
2060 Male, age 76, both hemispheres 116.6
Ventral periolivary nuclei
nTPM: 108.8
2130 Female, age 85, both hemispheres 118.7
2165 Male, age 80, both hemispheres 113.8
2023 Male, age 76, both hemispheres 101.7
2794 Female, age 91, left hemisphere 101.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 136.1
2302 Female, age 91, both hemispheres 163.2
2180 Male, age 61, both hemispheres 144.1
1986 Male, age 76, both hemispheres 133.9
2741 Female, age 85, both hemispheres 120.1
2118 Male, age 80, both hemispheres 119.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 127.0
2456 Female, age 91, both hemispheres 151.8
2840 Female, age 85, both hemispheres 127.2
2161 Male, age 80, both hemispheres 125.9
2449 Male, age 74, both hemispheres 119.4
1959 Male, age 76, both hemispheres 119.1
2359 Male, age 61, both hemispheres 118.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 302.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 293.6
FF:10182-103D2 60 years, female 359.4
FF:10165-103B3 76 years, female 227.7
Medulla oblongata
Scaled Tags Per Million: 302.1
FF:10174-103C3 60 years, female 431.1
FF:10155-103A2 76 years, female 253.7
FF:10038-101F2 18-64 years, mixed 221.4
Pons
Scaled Tags Per Million: 112.4
FF:10033-101E6 18-54 years, mixed 112.4

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 63.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 63.3
Samples: 4

Max nTPM: 71.4
Min nTPM: 53.3
Sample A Female 53.3
Sample B Female 71.4
Sample C Male 67.6
Sample D Male 61.0
Pons
nTPM: 53.1
Samples: 4

Max nTPM: 58.9
Min nTPM: 48.5
Sample A Female 55.0
Sample B Female 48.5
Sample C Male 49.8
Sample D Male 58.9

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 45.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 45.2
Samples: 4

Max nTPM: 47.1
Min nTPM: 43.9
Sample A Male 47.1
Sample B Male 43.9
Sample C Female 44.7
Sample D Female 44.9

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.6
69735640 Antisense, RP_050503_03_B11, Mouse strain C57BL/6J (56 days, male) 1.1
73520992 Antisense, RP_051101_02_G11, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 0.4
69735640 Antisense, RP_050503_03_B11, Mouse strain C57BL/6J (56 days, male) 0.8
73520992 Antisense, RP_051101_02_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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